1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
AAAGAAATTGGAACATTTTGTTTGTTCAGAATGTTCATCTGATGATGACATGAAGAAACCCCATGCTACATTTTCTGTATCACCAGGATCTGATGTCAAGgtgagactacctgcatccagtcacgaacaatttgagttgagatgcacttctacttatgttccttttcagtttccctgatcttactagagaggcattatta...
species | Glycine max |
transcript | GLYMA13G34740.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TGAAGAAACCCCATGCTACATTTTCTGTATCACCAGGATCTGATGTCAAG GTTGAGCCAAAGCGGCGGAAGAGATGACCATCACGAAGAATTAACTCATCTEST: gi|207735910|gb|GD709801.1|GD709801
genomic: TGAAGAAACCCCATGCTACATTTTCTGTATCACCAGGATCTGATGTCAAGgtgagactac ... gaatttgcagGTTGAGCCAAAGCGGCGGAAGAGATGACCATCACGAAGAATTAACTCATCT
EST: TGAAGAAACCCCATGCTACATTTTCTGTATCACCAGGATCTGATGTCAAG GTTGAGCCAAAGCGGCGGAAGAGATGACCATCACGAAGAATTAACTCATCTEST: gi|214008997|gb|DB984557.1|DB984557
genomic: TGAAGAAACCCCATGCTACATTTTCTGTATCACCAGGATCTGATGTCAAGgtgagactac ... gaatttgcagGTTGAGCCAAAGCGGCGGAAGAGATGACCATCACGAAGAATTAACTCATCT
EST: TGAAGAAACCCCATGCTACATTTTCTGTATCACCAGGATCTGATGTCAAG GTTGAGCCAAAGCGGCGGAAGAGATGACCATCACGAAGAATTAACTCATCTEST: gi|209709125|gb|BW658841.1|BW658841
genomic: TGAAGAAACCCCATGCTACATTTTCTGTATCACCAGGATCTGATGTCAAGgtgagactac ... gaatttgcagGTTGAGCCAAAGCGGCGGAAGAGATGACCATCACGAAGAATTAACTCATCT
EST: TGAAGAAACCCCATGCTACATTTTCTGTATCACCAGGATCTGATGTCAAG GTTGAGCCAAAGCGGCGGAAGAGATGACCATCACGAAGAATTAACTCATCTEST: gi|209701039|gb|BW652617.1|BW652617
genomic: TGAAGAAACCCCATGCTACATTTTCTGTATCACCAGGATCTGATGTCAAGgtgagactac ... gaatttgcagGTTGAGCCAAAGCGGCGGAAGAGATGACCATCACGAAGAATTAACTCATCT
EST: TGAAGAAACCCCATGCTACATTTTCTGTATCACCAGGATCTGATGTCAAG GTTGAGCCAAAGCGGCGGAAGAGATGACCATCACGAAGAATTAACTCATCTEST: gi|193400351|gb|FK365822.1|FK365822
genomic: TGAAGAAACCCCATGCTACATTTTCTGTATCACCAGGATCTGATGTCAAGgtgagactac ... gaatttgcagGTTGAGCCAAAGCGGCGGAAGAGATGACCATCACGAAGAATTAACTCATCT
EST: TGAAGAAACCCCATGCTACATTTTCTGTATCACCAGGATCTGATGTCAAG GTTGAGCCAAAGCGGCGGAAGAGATGACCATCACGAAGAATTAACTCATCT
genomic: TGAAGAAACCCCATGCTACATTTTCTGTATCACCAGGATCTGATGTCAAGgtgagactac ... gaatttgcagGTTGAGCCAAAGCGGCGGAAGAGATGACCATCACGAAGAATTAACTCATCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAAGAAATTGGAACATTTTGTTTGTTCAGAATGTTCATCTGATGATGACATGAAGAAACCCCATGCTACATTTTCTGTATCACCAGGATCTGATGTCAAGgtgagactacctgcatccagtcacgaacaatttgagttgagatgcacttctacttatgttccttttcagtttccctgatcttactagagaggcattatta
- - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA