1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
ATTCTCAATCTTGGCTTTCCTTCCAGTGACACTATATTCTCTATCTAGAAAATTCAAACAGGCATTTATTGCTGCGGCTGTCACATCAATTCTTCTTCTTgtaagtcagactacccccccccctctcattgaccttctctggcctataaattatgtctataccatctaatattgtatataatgtatagttttggttgcatcctgttatgctattaaatttcatatttcatatcctttacaatggcagcatattttaattgtgtttacag
species | Glycine max |
transcript | GLYMA13G34570.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: AATTCAAACAGGCATTTATTGCTGCGGCTGTCACATCAATTCTTCTTCTT GCATTGTCAATAGTTATGGACTTTTACTACTATGGAAAATGGACTTCAEST: gi|15286732|gb|BI470623.1|BI470623
genomic: AATTCAAACAGGCATTTATTGCTGCGGCTGTCACATCAATTCTTCTTCTTgtaagtcaga ... gtgtttacagGCATTGTCAATAGTTATGGACTTTTACTACTATGGAAAATGGACTTCA
EST: AATTCAAACAGGCATTTATTGCTGCGGCTGTCACATCAATTCTTCTTCTT GCATTGTCAATAGTTATGGACTTTTACTACTATGGAAAATGGACTTCATCTEST: gi|207771499|gb|GD744248.1|GD744248
genomic: AATTCAAACAGGCATTTATTGCTGCGGCTGTCACATCAATTCTTCTTCTTgtaagtcaga ... gtgtttacagGCATTGTCAATAGTTATGGACTTTTACTACTATGGAAAATGGACTTCATCT
EST: AATTCAAACAGGCATTTATTGCTGCGGCTGTCACATCAATTCTTCTTCTT GCATTGTCAATAGTTATGGACTTTTACTACTATGGAAAATGGACTTCATCTEST: gi|19938576|gb|BQ081785.1|BQ081785
genomic: AATTCAAACAGGCATTTATTGCTGCGGCTGTCACATCAATTCTTCTTCTTgtaagtcaga ... gtgtttacagGCATTGTCAATAGTTATGGACTTTTACTACTATGGAAAATGGACTTCATCT
EST: AATTCAAACAGGCATTTATTGCTGCGGCTGTCACATCAATTCTTCTTCTT GCATTGTCAATAGTTATGGACTTTTACTACTATGGAAAATGGACTTCATCTEST: gi|298178623|gb|HO024358.1|HO024358
genomic: AATTCAAACAGGCATTTATTGCTGCGGCTGTCACATCAATTCTTCTTCTTgtaagtcaga ... gtgtttacagGCATTGTCAATAGTTATGGACTTTTACTACTATGGAAAATGGACTTCATCT
EST: AATTCAAACAGGCATTTATTGCTGCGGCTGTCACATCAATTCTTCTTCTT GCATTGTCAATAGTTATGGACTTTTACTACTATGGAAAATGGACTTCATCTEST: gi|208315224|gb|GE117010.1|GE117010
genomic: AATTCAAACAGGCATTTATTGCTGCGGCTGTCACATCAATTCTTCTTCTTgtaagtcaga ... gtgtttacagGCATTGTCAATAGTTATGGACTTTTACTACTATGGAAAATGGACTTCATCT
EST: AATTCAAACAGGCATTTATTGCTGCGGCTGTCACATCAATTCTTCTTCTT GCATTGTCAATAGTTATGGACTTTTACTACTATGGAAAATGGACTTCATCTEST: gi|208281839|gb|GE078565.1|GE078565
genomic: AATTCAAACAGGCATTTATTGCTGCGGCTGTCACATCAATTCTTCTTCTTgtaagtcaga ... gtgtttacagGCATTGTCAATAGTTATGGACTTTTACTACTATGGAAAATGGACTTCATCT
EST: AATTCAAACAGGCATTTATTGCTGCGGCTGTCACATCAATTCTTCTTCTT GCATTGTCAATAGTTATGGACTTTTACTACTATGGAAAATAGGACTTCATC
genomic: AATTCAAACAGGCATTTATTGCTGCGGCTGTCACATCAATTCTTCTTCTTgtaagtcaga ... gtgtttacagGCATTGTCAATAGTTATGGACTTTTACTACTATGGAAAAT-GGACTTCATC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTCTCAATCTTGGCTTTCCTTCCAGTGACACTATATTCTCTATCTAGAAAATTCAAACAGGCATTTATTGCTGCGGCTGTCACATCAATTCTTCTTCTTgtaagtcagactacccccccccctctcattgaccttctctggcctataaattatgtctataccatctaatattgtatataatgtatagttttggttgcatcctgttatgctattaaatttcatatttcatatcctttacaatggcagcatattttaattgtgtttacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC