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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTGTCCATTTTGCCGAAAGgtatgaatttttaaggattcaaatagacttctctttcaagttttcttcatgagaattccttctgttttaagattctgtttcctgtcttggtgtaaacaac...

Basic information

species Glycine max
transcript GLYMA13G22160.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298180752|gb|HO022191.1|HO022191
EST:     TGAGAGCTGTCCATTTTGCCGAAAG                         GTCAGAGAAATTGTTGCCATTTTGGAC
genomic: TGAGACCTGTCCATTTTGCCGAAAGgtatgaattt ... ctccatacagGTTAGAGAAATTGTTGCCATTTTGGAC
EST: gi|298198201|gb|HO039740.1|HO039740
EST:     TGAGAGCTGTCCATTTTGCCGAAAG                         GTTAGAGAAATTGTTGCCATTTTGGACCTTGATGTTCTTTTCTAT
genomic: TGAGACCTGTCCATTTTGCCGAAAGgtatgaattt ... ctccatacagGTTAGAGAAATTGTTGCCATTTTGGACCTTGATGTTCTTTTCTAT
EST: gi|298182803|gb|HO031538.1|HO031538
EST:     TGAGAGCTGTCCATTTTGCCAAAAG                         GTTAGAGAAATTGTTGCCATTTTGGACCTTGATGTTCTTTTCTAT
genomic: TGAGACCTGTCCATTTTGCCGAAAGgtatgaattt ... ctccatacagGTTAGAGAAATTGTTGCCATTTTGGACCTTGATGTTCTTTTCTAT