1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CAGCATACAATCAAAAGAACAAGTTGAAGCCAAGTTACTGAGCAAGTATGAAGCTGCTATGAGAAGAGAAAGAGCAATGGCTTATTCATTCTCTCATCAGgtttttaatttctcttatgaatttacatttgttaggatagtgaaacaaacaaatggaaaaaaagatgtgaaagcaaattgttggtgaacttgaacatcat...
species | Glycine max |
transcript | GLYMA13G20070.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: AAGCTGCTATGAGAAGAGAAAGAGCAATGGCTTATTCATTCTCTCATCAG CAAAACTGGAAGAATGCATCAAGATCTGTAAACCCAATGTTCATGGATCCAEST: gi|207734778|gb|GD709271.1|GD709271
genomic: AAGCTGCTATGAGAAGAGAAAGAGCAATGGCTTATTCATTCTCTCATCAGgtttttaatt ... atcttgacagCAAAACTGGAAGAATGCATCAAGATCTGTAAACCCAATGTTCATGGATCCA
EST: AAGCTGCTATGAGAAGAGAAAGAGCAATGGCTTATTCATTCTCTCATCAG CAAAACTGGAAGAATGCATCAAGATCTGTAAACCCAATGTTCATGGATCCAEST: gi|4313650|gb|AI460769.1|AI460769
genomic: AAGCTGCTATGAGAAGAGAAAGAGCAATGGCTTATTCATTCTCTCATCAGgtttttaatt ... atcttgacagCAAAACTGGAAGAATGCATCAAGATCTGTAAACCCAATGTTCATGGATCCA
EST: AAGCTGCTATGAGAAGAGAAAGAGCAATGGCTTATTCATTCTCTCATCAG CAAAACTGGAAGAATGCATCAAGATCTGTAAACCCAATGTTCATGGATCCA
genomic: AAGCTGCTATGAGAAGAGAAAGAGCAATGGCTTATTCATTCTCTCATCAGgtttttaatt ... atcttgacagCAAAACTGGAAGAATGCATCAAGATCTGTAAACCCAATGTTCATGGATCCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAGCATACAATCAAAAGAACAAGTTGAAGCCAAGTTACTGAGCAAGTATGAAGCTGCTATGAGAAGAGAAAGAGCAATGGCTTATTCATTCTCTCATCAGgtttttaatttctcttatgaatttacatttgttaggatagtgaaacaaacaaatggaaaaaaagatgtgaaagcaaattgttggtgaacttgaacatcat
- - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaaacaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggaaaaaa