1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
AATATTCGAGATTGTGACTGGAAGTGCAAAAAAACAGACTAAGGAAAAGTCATCCATTTCAAACCACTCCAGCAACAAATCAAAATCTGGTTCAAAAGGGgtaaaaaaatcttagtaccttcactctccctttatattattttttatggtcataattgctctattagaaaatatttggactctagtaatgcatcatatac...
species | Glycine max |
transcript | GLYMA13G16740.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CATCCATTTCAAACCACTCCAGCAACAAATCAAAATCTGGTTCAAAAGGG CGAGGATCTGAATCAGGGAAGTATTCAAAGCAAACAAAGGACGAGGAGGAAEST: gi|192298086|gb|FG991366.1|FG991366
genomic: CATCCATTTCAAACCACTCCAGCAACAAATCAAAATCTGGTTCAAAAGGGgtaaaaaaat ... aacaaaatagCGAGGATCTGAATCAGGGAAGTATTCAAAGCAAACAAAGGACGAGGAGGAA
EST: CATCCATTTCAAACCACTCCAGCAACAAATCAAAATCTGGTTCAAAAGGG CGAGGATCTGAATCAGGGAAGTATTCAAAGCAAACAAAGGACGAGGAGGAAEST: gi|193370483|gb|FK334847.1|FK334847
genomic: CATCCATTTCAAACCACTCCAGCAACAAATCAAAATCTGGTTCAAAAGGGgtaaaaaaat ... aacaaaatagCGAGGATCTGAATCAGGGAAGTATTCAAAGCAAACAAAGGACGAGGAGGAA
EST: CATCCATTTCAAACCACTCCAGCAACAAATCAAAATCTGGTTCAAAAGGG CGAGGATCTGAATCAGGGAAGTATTCAAAGCAAACAAAGGACGAGGAGGAAEST: gi|193302306|gb|FK268695.1|FK268695
genomic: CATCCATTTCAAACCACTCCAGCAACAAATCAAAATCTGGTTCAAAAGGGgtaaaaaaat ... aacaaaatagCGAGGATCTGAATCAGGGAAGTATTCAAAGCAAACAAAGGACGAGGAGGAA
EST: CATCCATTTCAAACCACTCCAGCAACAAATCAAAATCTGGTTCAAAAGGG CGAGGATCTGAATCAGGGAAGTATTCAAAGCAAACAAAGGACGAGGAGGAAEST: gi|193302675|gb|FK267053.1|FK267053
genomic: CATCCATTTCAAACCACTCCAGCAACAAATCAAAATCTGGTTCAAAAGGGgtaaaaaaat ... aacaaaatagCGAGGATCTGAATCAGGGAAGTATTCAAAGCAAACAAAGGACGAGGAGGAA
EST: CATCCATTTCAAACCACTCCAGCAACAAATCAAAATCTGGTTCAAAAGGG CGAGGATCTGAATCAGGGAAGTATTCAAAGCAAACAAAGGACGAGGAGGAA
genomic: CATCCATTTCAAACCACTCCAGCAACAAATCAAAATCTGGTTCAAAAGGGgtaaaaaaat ... aacaaaatagCGAGGATCTGAATCAGGGAAGTATTCAAAGCAAACAAAGGACGAGGAGGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AATATTCGAGATTGTGACTGGAAGTGCAAAAAAACAGACTAAGGAAAAGTCATCCATTTCAAACCACTCCAGCAACAAATCAAAATCTGGTTCAAAAGGGgtaaaaaaatcttagtaccttcactctccctttatattattttttatggtcataattgctctattagaaaatatttggactctagtaatgcatcatatac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctctccc