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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCGACATGAATGGCGGTGTGGATATTGTAAGAAAAGCTTTCGTGAAGAAAAATTTCTTGATCAGCATTTTGACAGCAGACACTACAATTTTCTGAATCTAgtatgtcaatttcattccttttctcattgtgtttggaggatacataatgtgctgtgcgcttaaagcttttaattttatcagttattgaatgagtttgaag...

Basic information

species Glycine max
transcript GLYMA13G02180.1
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA13G02180.1 (Glycine max), 5'ss of exon 4
lower sequence: Vv17s0000g10170.t01 (Vitis vinifera), 5'ss of exon 4
TCGACATGAATGGCGGTGTGGATATTGTAAGAAAAGCTTTCGTGAAGAAAAATTTCTTGATCAGCATTTTGACAGCAGACACTACAATTTTCTGAATCTAgtatgtcaatttcattccttttctcattgtgtttggaggatacataatgtgctgtgcgcttaaagcttttaattttatcag-ttattgaatgagtttgaag-
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TATAAATGAATGGCGCTGTGGATACTGCAAGAAAAGCTTCCGTGCAGAGAAATTTCTTGATCAACATTTTGACAACAGACACTATGGTCTTCTGAATGTTgtatgtggtccctggttccttgtccattttgttcataccattagt--tgtcaagttcaatctgaatgctcaaatttatcaaattgtctatttcattttatgt