1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
AGTGGAGTCTGGGGCTCATTGCATACAAATATTTGATTCATGGGGTGGACAACTACCACCTGAAATGTGGGAACGCTGGTCAAAGCCTTATATCAAAGAGgtaacagaaaaaaaaatctccatttgcctgatgaaattgttttttaattttttaaacttcgcaatttggaattcttgttattaagccttcacttatgtta...
species | Glycine max |
transcript | GLYMA12G35880.2 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: AACTACCACCTGAAATGTGGGAACGCTGGTCAAAGCCTTATATCAAAGAG ATTGTAAATTTGGTCAAGAAAAAATGCCCTGGGGTACCAATTGTTCTTTATEST: gi|7030328|gb|AW460111.1|AW460111
genomic: AACTACCACCTGAAATGTGGGAACGCTGGTCAAAGCCTTATATCAAAGAGgtaacagaaa ... gaatttccagATTGTAAATTTGGTCAAGAAAAAATGCCCTGGGGTACCAATTGTTCTTTAT
EST: AACTACCACCTGAAATGTGGGAACGCTGGTCAAAGCCTTATATCAAAGAG ATTGTAAATGTGGTCAAGAAAAAATGCCCTGGGGTACCAATTGTTCTTTATEST: gi|58020439|gb|CX707181.1|CX707181
genomic: AACTACCACCTGAAATGTGGGAACGCTGGTCAAAGCCTTATATCAAAGAGgtaacagaaa ... gaatttccagATTGTAAATTTGGTCAAGAAAAAATGCCCTGGGGTACCAATTGTTCTTTAT
EST: AACTACCACCTGAAATGTGGGAACGCTGGTCAAAGCCTTATATCAAAGAG ATTGTAAATTTGGTCAAGAAAAAATGCCCTGGGGTACCAATTGTTCTTTATEST: gi|22932793|gb|BU549932.1|BU549932
genomic: AACTACCACCTGAAATGTGGGAACGCTGGTCAAAGCCTTATATCAAAGAGgtaacagaaa ... gaatttccagATTGTAAATTTGGTCAAGAAAAAATGCCCTGGGGTACCAATTGTTCTTTAT
EST: AACTACCACCTGAAATGTGGGAACGCTGGTCAAAGCCTTATATCAAAGAG ATTGTAAATTTGGTCAAGAAAAAATGCCCTGGGGTACCAATTGTTCTTTAT
genomic: AACTACCACCTGAAATGTGGGAACGCTGGTCAAAGCCTTATATCAAAGAGgtaacagaaa ... gaatttccagATTGTAAATTTGGTCAAGAAAAAATGCCCTGGGGTACCAATTGTTCTTTAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGTGGAGTCTGGGGCTCATTGCATACAAATATTTGATTCATGGGGTGGACAACTACCACCTGAAATGTGGGAACGCTGGTCAAAGCCTTATATCAAAGAGgtaacagaaaaaaaaatctccatttgcctgatgaaattgttttttaattttttaaacttcgcaatttggaattcttgttattaagccttcacttatgtta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaaaaaaa