1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CTTGTTATGGTCGTTGATTCGCGAGATCCGCTGTTCTATCGTTGTCCAGATCTTGAGgtgagactttctttcttccataaaaaattggtggcaaaatgctaacttgacaactctagagatggctaggtttgtggcaaatctaactgattgtaaggat...
species | Glycine max |
transcript | GLYMA12G10130.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TGGTCGTTGATTCGCGAGATCCGCTGTTCTATCGTTGTCCAGATCTTGAG GCTTATGCACGGGAGGTTGATGAGCATAAACGTACATTGCTTTTGGTTAATEST: gi|254321464|gb|GR824781.1|GR824781
genomic: TGGTCGTTGATTCGCGAGATCCGCTGTTCTATCGTTGTCCAGATCTTGAGgtgagacttt ... tttggtacagGCTTATGCACGGGAGGTTGATGAGCATAAACGTACATTGCTTTTGGTTAAT
EST: TGGTCGTTGATTCGCGAGATCCGCTGTTCTATCGTTGTCCAGATCTTGAG GCTTATGCACGGGAGGTTGATGAGCATAAACGTACATTGCTTTTGGTTEST: gi|193607283|gb|FK558750.1|FK558750
genomic: TGGTCGTTGATTCGCGAGATCCGCTGTTCTATCGTTGTCCAGATCTTGAGgtgagacttt ... tttggtacagGCTTATGCACGGGAGGTTGATGAGCATAAACGTACATTGCTTTTGGTT
EST: TCCAGATCTTGAG GCTTATGTACGGGAGGTTGATGAGCATAAACGCACATTGCTTTTGGTTAAT
genomic: TCCAGATCTTGAGgtgagacttt ... tttggtacagGCTTATGCACGGGAGGTTGATGAGCATAAACGTACATTGCTTTTGGTTAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTTGTTATGGTCGTTGATTCGCGAGATCCGCTGTTCTATCGTTGTCCAGATCTTGAGgtgagactttctttcttccataaaaaattggtggcaaaatgctaacttgacaactctagagatggctaggtttgtggcaaatctaactgattgtaaggat
- - - - - - - - - - - GAGATC
- - - - - - - - - - - - - - GCTGTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ataaaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttggtgg