1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CATGTCGCCTACCACAAACTACAAGATGCAGGAGCAGTTGCTAGTTCTGCTGCAGCAAAGATCTATGGCTTGAATATACTTGATCAAGACATTCAGgtctgggtccatgttgtcagtgtttacttgtgtggttgacagttctagttcatggtagatttgatcactgatggatttacatttgcag
species | Glycine max |
transcript | GLYMA12G07720.3 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CTGCTGCAGCAAAGATCTATGGCTTGAATATACTTGATCAAGACATTCAG GATGACAGTGATAATGTCACCCGATTTTTAATGTTAGCACGAGAACCTATAEST: gi|7147398|gb|AW509320.1|AW509320
genomic: CTGCTGCAGCAAAGATCTATGGCTTGAATATACTTGATCAAGACATTCAGgtctgggtcc ... acatttgcagGATGACAGTGATAATGTCACCCGATTTTTAATGTTAGCACGAGAACCTATA
EST: CTGCTGCAGCAAAGATCTATGGCTTGA-TATACTTGATCAAGACATTCAG GATGACAGTGATAATGTCACCCGATTATTAATGTTAGCACGAGAACCTATA
genomic: CTGCTGCAGCAAAGATCTATGGCTTGAATATACTTGATCAAGACATTCAGgtctgggtcc ... acatttgcagGATGACAGTGATAATGTCACCCGATTTTTAATGTTAGCACGAGAACCTATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CATGTCGCCTACCACAAACTACAAGATGCAGGAGCAGTTGCTAGTTCTGCTGCAGCAAAGATCTATGGCTTGAATATACTTGATCAAGACATTCAGgtctgggtccatgttgtcagtgtttacttgtgtggttgacagttctagttcatggtagatttgatcactgatggatttacatttgcag
- - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG