1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GTCATTGTTGCTGATAACTACTTCACTGGATCAAAGGACAACCTCAAAAAATGGATTGGTCATCCAAGATTCGAGCTTATTCGTCATGgtatactacattttttcgtactattcaacgtgtcaactatctataaattaaattgttgggcatatgatagagtgaaggttagattatattttgtctcatt...
species | Glycine max |
transcript | GLYMA12G06990.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CAACCTCAAAAAATGGATTGGTCATCCAAGATTCGAGCTTATTCGTCATG ATGTCACTGAACCTTTGACGATTGAGGTTGATCATATCTACCATCTTGCGTEST: gi|12774402|gb|BG239329.1|BG239329
genomic: CAACCTCAAAAAATGGATTGGTCATCCAAGATTCGAGCTTATTCGTCATGgtatactaca ... ccctttgtagATGTCACTGAACCTTTGACGATTGAGGTTGATCAGATCTACCATCTTGCGT
EST: CAACCTCAAAAAATGGATTGGTCATCCAAGATTCGAGCTTATTCGTCATG ATGTCACTGAACCTTTGACGATTGAGGTTGATCAGATCTACCATCTTGCGTEST: gi|213593306|gb|DB973555.1|DB973555
genomic: CAACCTCAAAAAATGGATTGGTCATCCAAGATTCGAGCTTATTCGTCATGgtatactaca ... ccctttgtagATGTCACTGAACCTTTGACGATTGAGGTTGATCAGATCTACCATCTTGCGT
EST: CAACCTCAAAAAATGGATTGGTCATCCAAGATTCGAGCTTATTCGTCATG ATGTCACTGAACCTTTGACGATTGAGGTTGATCAGATCTACCATCTTGCGTEST: gi|16277140|gb|BI942224.1|BI942224
genomic: CAACCTCAAAAAATGGATTGGTCATCCAAGATTCGAGCTTATTCGTCATGgtatactaca ... ccctttgtagATGTCACTGAACCTTTGACGATTGAGGTTGATCAGATCTACCATCTTGCGT
EST: CAACCTCAAAAAATGGATTGGTCATCCAAGATTCGAGCTTATTCCTCATG ATGTCACTGAACCTTTGACGATTGAGGTTGATCAGATCTACCATCTTGCGTEST: gi|298196896|gb|HO041639.1|HO041639
genomic: CAACCTCAAAAAATGGATTGGTCATCCAAGATTCGAGCTTATTCGTCATGgtatactaca ... ccctttgtagATGTCACTGAACCTTTGACGATTGAGGTTGATCAGATCTACCATCTTGCGT
EST: CAACCTCAAAAAATGGATTGGTCATCCAAGATTCGAGCTTATTCGTCATG ATGTCACTGAACCTTTGACGATTGAGGTTGATCAGATCTACCATCTTGCGT
genomic: CAACCTCAAAAAATGGATTGGTCATCCAAGATTCGAGCTTATTCGTCATGgtatactaca ... ccctttgtagATGTCACTGAACCTTTGACGATTGAGGTTGATCAGATCTACCATCTTGCGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCATTGTTGCTGATAACTACTTCACTGGATCAAAGGACAACCTCAAAAAATGGATTGGTCATCCAAGATTCGAGCTTATTCGTCATGgtatactacattttttcgtactattcaacgtgtcaactatctataaattaaattgttgggcatatgatagagtgaaggttagattatattttgtctcatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT
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