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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAAGAATACAACTTGAGACGTCAAGGCTATATCGGCAGGCTGGGGTTAACCCACTGGCAGgtacttgtctttattttgttgttttcttcgtcttaaacaacagttctgtataataatcccttgacacatgaagctaataaacaccggtcctatggaataa...

Basic information

species Glycine max
transcript GLYMA12G06920.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|120533265|gb|EH261398.1|EH261398
EST:     ACTTGAGACGTCAAGGCTATATCGGCAGGCTGGGGTTAACCCACTGGCAG                         GTTGTTTACCAACTTTGGCTACAATTCCAGTCTGGATTGGTCTCTACCAAG
genomic: ACTTGAGACGTCAAGGCTATATCGGCAGGCTGGGGTTAACCCACTGGCAGgtacttgtct ... atttttatagGTTGTTTACCAACTTTGGCTACAATTCCAGTCTGGATTGGTCTCTACCAAG
EST: gi|120533673|gb|EH261806.1|EH261806
EST:     ACTTGAGACGTCAAGGCTATATCGGCAGGCTGGGGTTAACCCACTGGCAG                         GTTGTTTACCAACTTTGGCTACAATTCCAGTCTGGATTGGTCTCTACCAAG
genomic: ACTTGAGACGTCAAGGCTATATCGGCAGGCTGGGGTTAACCCACTGGCAGgtacttgtct ... atttttatagGTTGTTTACCAACTTTGGCTACAATTCCAGTCTGGATTGGTCTCTACCAAG
EST: gi|120533657|gb|EH261790.1|EH261790
EST:     ACTTGAGACGTCAAGGCTATATCGGCAGGCTGGGGTTAACCCACTGGCAG                         GTTGTTTACCAACTTTGGCTACAATTCCAGTCTGGATTGGTCTCTACCAAG
genomic: ACTTGAGACGTCAAGGCTATATCGGCAGGCTGGGGTTAACCCACTGGCAGgtacttgtct ... atttttatagGTTGTTTACCAACTTTGGCTACAATTCCAGTCTGGATTGGTCTCTACCAAG
EST: gi|16105497|gb|BI893237.1|BI893237
EST:     CCCACTGGCAG                         GTTGTTTACCAACTTTGGCTACAATTCCAGTCTGGATTGGTCTCTACCAAG
genomic: CCCACTGGCAGgtacttgtct ... atttttatagGTTGTTTACCAACTTTGGCTACAATTCCAGTCTGGATTGGTCTCTACCAAG
EST: gi|10233625|gb|BE802513.1|BE802513
EST:     ACTTGAGACGTCAAGGCTATATCGGCAGGCTGGGGTTAACCCACTGGCAG                         GTTGTTTACCAACTTTGGCTACAATTCCAGTCTGGATTGGTCTCTACCAAG
genomic: ACTTGAGACGTCAAGGCTATATCGGCAGGCTGGGGTTAACCCACTGGCAGgtacttgtct ... atttttatagGTTGTTTACCAACTTTGGCTACAATTCCAGTCTGGATTGGTCTCTACCAAG