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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGAGTTTGAGAAAGCTTTTAAGATAAAGTTTCCTGCTTGCACAATTGCCGCCAAAAGACACATTGATTCAAGCACCACGATACTAGATGTTCAAGGCGTGgtatgttgctgttaattgttcctcattgtatgtgcctgtggattcctgtgacatatgggaaatttatgttgtagtttcaacttttag

Basic information

species Glycine max
transcript GLYMA12G04460.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193724403|gb|FK657985.1|FK657985
EST:     CCAAAAGACACATTGATTCAAGCACCACGATACTAGATGTTCAAGGCGTG                         GGCCTCAAGAACTTTACAAAGTCTGCTCGGGATCTCATTATGCGGTTACAA
genomic: CCAAAAGACACATTGATTCAAGCACCACGATACTAGATGTTCAAGGCGTGgtatgttgct ... caacttttagGGCCTCAAGAACTTTACAAAGTCTGCTCGGGATCTCATTATGCGGTTACAA
EST: gi|193320737|gb|FK283122.1|FK283122
EST:     CCAAAAGACACATTGATTCAAGCACCACGATACTAGATGTTCAAGGCGTG                         GGCCTCAAGAACTTTACAAAGTCTGCTCGGGATCTCATTATGCGGTTACAA
genomic: CCAAAAGACACATTGATTCAAGCACCACGATACTAGATGTTCAAGGCGTGgtatgttgct ... caacttttagGGCCTCAAGAACTTTACAAAGTCTGCTCGGGATCTCATTATGCGGTTACAA
EST: gi|193481751|gb|FK446870.1|FK446870
EST:     CACGATACTAGATGTTCAAGGCGTG                         GGCCTCAAGAACTTTACAAAGTCTGCTCGGGATCTCATTATGCGGTTACAA
genomic: CACGATACTAGATGTTCAAGGCGTGgtatgttgct ... caacttttagGGCCTCAAGAACTTTACAAAGTCTGCTCGGGATCTCATTATGCGGTTACAA
EST: gi|151397966|gb|EV267839.1|EV267839
EST:     CCAAAAGACACATTGATTCAAGCACCACGATACTAGATGTTCAAGGCGTG                         GGCCTCAAGAACTTTACAAAGTCTGCTCGGGATCTCATTATGCGGTTACAA
genomic: CCAAAAGACACATTGATTCAAGCACCACGATACTAGATGTTCAAGGCGTGgtatgttgct ... caacttttagGGCCTCAAGAACTTTACAAAGTCTGCTCGGGATCTCATTATGCGGTTACAA
EST: gi|207760411|gb|GD731382.1|GD731382
EST:     CCAAAAGACACATTGATTCAAGCACCACGATACTAGATGTTCAAGGCGTG                         GGCCTCAAGAACTTTACAAAGTCTGCTCGGGATCTCATTATGCGGTTACAA
genomic: CCAAAAGACACATTGATTCAAGCACCACGATACTAGATGTTCAAGGCGTGgtatgttgct ... caacttttagGGCCTCAAGAACTTTACAAAGTCTGCTCGGGATCTCATTATGCGGTTACAA