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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGAATTGTGCAACCATGGACTTGTAACACAAGCTGCCTCCCTCATTTCTAACAGCAGTTCTGGGGGTGGTCAGGCTTCTCTCAGCACGCCGACATATACTgtaagtgcaatttttacttttagttagatgcattttgcctatagtttggtccttgacctgggtatatgcag

Basic information

species Glycine max
transcript GLYMA12G03640.1
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA12G03640.1 (Glycine max), 5'ss of exon 4
lower sequence: Vv03s0038g02340.t01 (Vitis vinifera), 5'ss of exon 4
TGAATTGTGCAACCATGGACTTGTAACACAAGCTGCCTCCCTCATTTCTAACAGCAGTTCTGGGGGTGGTCAGGCTTCTCTCAGCACGCCGACATATACTgtaagtgcaatttttacttttagttagatgcat------tttgcctatagtttggtccttgacctg-ggtatatgcag
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TGAACTATGCAATCATGGACTAGTTGACCAAGCTGCCTCTCTCATTTCCACCAGTAATTCTGGGGGTGGGCAGGCATCCCTTAGCACGCCGACGTACACGgtagatacaacttttattttcaaaattccacatcaaaggttttcttcgggctccaaatgtgacttgtaaggcatgcag