1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GAATGCAAGAATCACTCCAAATCAGAATATCATCTTGACTGATGTTCGTGCTGCATGGAAGCGTCCAATTACAACCACTCTTGCTCAAGCTGGTTTGCTGgtgagatgtttacagcttaatgtctcacaaaattatatgcaatttttgtttacagcttaatgtttagttgtttatagattatactttaattgttttgtgt...
species | Glycine max |
transcript | GLYMA12G02200.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CTGCATGGAAGCGTCCAATTACAACCACTCTTGCTCAAGCTGGTTTGCTG CAACCTAGATTTGTAGATCCCCTCAACATAACAGCAATGGCATGCCCTGCTEST: gi|23727938|gb|BU762009.1|BU762009
genomic: CTGCATGGAAGCGTCCAATTACAACCACTCTTGCTCAAGCTGGTTTGCTGgtgagatgtt ... gtgaacacagCAACCTAGATTTGTAGATCCCCTCAACATAACAGCAATGGCATGCCCTGCT
EST: CTGCATGGAAGCGTCCAATTACAACCACTCTTGCTCAAGCTGGTTTGCTG CAACCTAGATTTGTAGATCCCCTCAACATAACAGCAATGGCATGCCCTGCT
genomic: CTGCATGGAAGCGTCCAATTACAACCACTCTTGCTCAAGCTGGTTTGCTGgtgagatgtt ... gtgaacacagCAACCTAGATTTGTAGATCCCCTCAACATAACAGCAATGGCATGCCCTGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAATGCAAGAATCACTCCAAATCAGAATATCATCTTGACTGATGTTCGTGCTGCATGGAAGCGTCCAATTACAACCACTCTTGCTCAAGCTGGTTTGCTGgtgagatgtttacagcttaatgtctcacaaaattatatgcaatttttgtttacagcttaatgtttagttgtttatagattatactttaattgttttgtgt
- - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG