1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
AGTCCAGCTTAAATGTCCTAAATCCTGAAGAAAACGAGCTCGTTGCCCCAGTGGAGCTTTGCCCCATCTTGAAGATGTTATATAAAATACTAATAATTAGgtaataatttttgctaccttactgtaatgctctctcctcacttaatgggataagtctattaaaatcaatggattatgcttccagcatcatctgacataca...
species | Glycine max |
transcript | GLYMA12G01380.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GTGGAGCTTTGCCCCATCTTGAAGATGTTATATAAAATACTTATAATTAG GGAATCTCCAGTAGAGGCAATTCTTCAAGCATTGCGAGATGAGACAATGAAEST: gi|193606512|gb|FK557825.1|FK557825
genomic: GTGGAGCTTTGCCCCATCTTGAAGATGTTATATAAAATACTAATAATTAGgtaataattt ... taatattcagGGAATCTCCAGTAGAGGCAATTCTTCAAGCATTGCGAGATGAGACAATGAA
EST: GTGGAGCTTTGCCCCATCTTGAAGATGTTATATAAAATACTAATAATTAG GGAATCTCCAGTAGAGGCAATTCTTCAAGCATTGCGAGATGAGACAATGAA
genomic: GTGGAGCTTTGCCCCATCTTGAAGATGTTATATAAAATACTAATAATTAGgtaataattt ... taatattcagGGAATCTCCAGTAGAGGCAATTCTTCAAGCATTGCGAGATGAGACAATGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGTCCAGCTTAAATGTCCTAAATCCTGAAGAAAACGAGCTCGTTGCCCCAGTGGAGCTTTGCCCCATCTTGAAGATGTTATATAAAATACTAATAATTAGgtaataatttttgctaccttactgtaatgctctctcctcacttaatgggataagtctattaaaatcaatggattatgcttccagcatcatctgacataca
- - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctctctc