1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GCGTAAAAAATTTCCTGCAACATCATTCACTGGATCACCAGTTCTTTCTGATTCTGGATTTGATTTGTTGAACAAGCTTCTAACTTATGACCCTGAAAAGgtaaacaatacataccacttgacttaatttagtaaatagtaatttgtttcagtgtttcataagaatatgatcagttatcattaatatacacag
species | Glycine max |
transcript | GLYMA11G37270.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: ATTCTGGATTTGATTTGTTGAACAAGCTTCTAACTTATGACCCTGAAAAG CGGATCACAGCTGAAGAAGCTCTAAACCATGAGTGGTTTCGTGAAGTTCCCEST: gi|20814889|gb|BQ299367.1|BQ299367
genomic: ATTCTGGATTTGATTTGTTGAACAAGCTTCTAACTTATGACCCTGAAAAGgtaaacaata ... atatacacagCGGATCACAGCTGAAGAAGCTCTAAACCATGAGTGGTTTCGTGAAGTTCCC
EST: ATTCTGGATTTGATTTGTTGAACAAGCTTCTAACTTATGACCCTGAAAAG CGGATCACAGCTGAAGAAGCTCTAAACCATGACTGGTTTCGTGAAGTTCCC
genomic: ATTCTGGATTTGATTTGTTGAACAAGCTTCTAACTTATGACCCTGAAAAGgtaaacaata ... atatacacagCGGATCACAGCTGAAGAAGCTCTAAACCATGAGTGGTTTCGTGAAGTTCCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCGTAAAAAATTTCCTGCAACATCATTCACTGGATCACCAGTTCTTTCTGATTCTGGATTTGATTTGTTGAACAAGCTTCTAACTTATGACCCTGAAAAGgtaaacaatacataccacttgacttaatttagtaaatagtaatttgtttcagtgtttcataagaatatgatcagttatcattaatatacacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT