Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAATTGAAAGCCTTGATCCAACCCTGTTGCGACCTGGTCGAATTGACAGGAAGATTGAATTGGTATTAAGTTTGCAAAAAGTGCAGTTACTATTCCAACTgtgtggaatattcaagtcagtacctggcttcgttattgagagtttcttgctaatgagattgaatgcttttattgtag

Basic information

species Glycine max
transcript GLYMA11G27200.1
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA11G27200.1 (Glycine max), 5'ss of exon 4
lower sequence: GRMZM2G104373_T01 (Zea mays), 5'ss of exon 4
GAATTGAAAGCCTTGATCCAACCCTGTTGCGACCTGGTCGAATTGACAGGAAGATTGAATTGGTATTAAGTT-TGCAAAAAGT--GCAGTTACTATTCCAA------CTgtgtggaatattcaagtcagtacctggcttcgttattgagag------tttcttgctaatgagattgaatgcttttatt-gtag
  |||||||| ||||||||| || || | || || |||||||||||||| |||||||||||    |||  |  ||  || | |  || |    | |||||       || ||||    |  |   | ||| ||||   |  | ||| | |       ||| ||| ||   | |||   || ||| ||  | ||
-TATTGAAAGTCTTGATCCAGCCTTGCTTCGCCCAGGTCGAATTGACAGAAAGATTGAATTCCCTTTACCTGATGTCAAGACTAGGCGGCGCATCTTCCAGgtgcttctatgtgatgaaagcttctgagt-cctgttcttttaattaaaaagcatgatttgttgttaccaaaattt--tgttttgatgagcag