1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GAATCTAAATCTCTTAAAGACATACCAGTGGTGATTATGTCCTCAGAGAATGTCCCAGCAAGGATTAACAGgtgaggaaaattacctccaattatatcaggaatccaatacaataaaaaaattattagagacccaaaataaaaaatgatcatttatgagggatccaaaacatattttagccaattcaaaaatttggattgcatccatgactgaacttcaaatctaacaagacattcatttttgtttgtaccag
species | Glycine max |
transcript | GLYMA11G21650.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: ATACCAGTGGTGATTATGTCCTCAGAGAATGTCCCAGCAAGGATTAACAG ATGCCTAGAAGAGGGAGCTGATGAATTCTTTCTGAAACCAGTTCAACAGTCEST: gi|192334799|gb|FK025948.1|FK025948
genomic: ATACCAGTGGTGATTATGTCCTCAGAGAATGTCCCAGCAAGGATTAACAGgtgaggaaaa ... tttgtaccagATGCCTAGAAGAGGGAGCTGATGAATTCTTTCTGAAACCAGTTCAACAGTC
EST: ATACCAGTGGTGATTATGTCCTCAGAGAATGTCCCAGCAAGGATTAACAG ATGCCTAGAAGAGGGAGCTGATGAATTCTTTCTGAAACCAGTTCAACAGTCEST: gi|7283519|gb|AW596125.1|AW596125
genomic: ATACCAGTGGTGATTATGTCCTCAGAGAATGTCCCAGCAAGGATTAACAGgtgaggaaaa ... tttgtaccagATGCCTAGAAGAGGGAGCTGATGAATTCTTTCTGAAACCAGTTCAACAGTC
EST: ATACCAGTGGTGATTATGTCCTCAGAGAATGTCCCAGCAAGGATTAACAG ATGCCTAGAAGAGGGAGCTGATGAATTCTTTCTGANACCAGTTCAACAGTCEST: gi|7795492|gb|AW780889.1|AW780889
genomic: ATACCAGTGGTGATTATGTCCTCAGAGAATGTCCCAGCAAGGATTAACAGgtgaggaaaa ... tttgtaccagATGCCTAGAAGAGGGAGCTGATGAATTCTTTCTGAAACCAGTTCAACAGTC
EST: ATACCAGTGGTGATTATGTCCTCATAGAATGTCCCAGCAAGGATTAACAT ATGCCTAGAAGAGGGAGCTGATGAATTCTTTCTGAAACCAATTCAACAGTCEST: gi|6725940|gb|AW310339.1|AW310339
genomic: ATACCAGTGGTGATTATGTCCTCAGAGAATGTCCCAGCAAGGATTAACAGgtgaggaaaa ... tttgtaccagATGCCTAGAAGAGGGAGCTGATGAATTCTTTCTGAAACCAGTTCAACAGTC
EST: ATACCAGTGGTGATTATGTCCTCAGAGAATGTCCAAGCAAGGATTAACAG ATGCCTAGAAGAGGGAGCTGATGAATTCTTTCTGAAACCAGTTCAACAGTCEST: gi|192334800|gb|FK025949.1|FK025949
genomic: ATACCAGTGGTGATTATGTCCTCAGAGAATGTCCCAGCAAGGATTAACAGgtgaggaaaa ... tttgtaccagATGCCTAGAAGAGGGAGCTGATGAATTCTTTCTGAAACCAGTTCAACAGTC
EST: ATACCAGTGGTGATTATGTCCTCAGAGAATGTCCCAGCAAGGATTAACAG ATGCCTAGAAGAGGGAGCTGATGAATTCTTTCTGAAACCAGTTCAACAGTCEST: gi|6725905|gb|AW310304.1|AW310304
genomic: ATACCAGTGGTGATTATGTCCTCAGAGAATGTCCCAGCAAGGATTAACAGgtgaggaaaa ... tttgtaccagATGCCTAGAAGAGGGAGCTGATGAATTCTTTCTGAAACCAGTTCAACAGTC
EST: ATACCAGTGGTGATTATGTCCTCAGAGAATGTCCCAGCAAGGATTAACAG ATGCCTAGAAGAGGGAGCTGATGAATTCTTTCTGAAACCAGTTCAACAGTC
genomic: ATACCAGTGGTGATTATGTCCTCAGAGAATGTCCCAGCAAGGATTAACAGgtgaggaaaa ... tttgtaccagATGCCTAGAAGAGGGAGCTGATGAATTCTTTCTGAAACCAGTTCAACAGTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAATCTAAATCTCTTAAAGACATACCAGTGGTGATTATGTCCTCAGAGAATGTCCCAGCAAGGATTAACAGgtgaggaaaattacctccaattatatcaggaatccaatacaataaaaaaattattagagacccaaaataaaaaatgatcatttatgagggatccaaaacatattttagccaattcaaaaatttggattgcatccatgactgaacttcaaatctaacaagacattcatttttgtttgtaccag
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