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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAAGAATCCCTGGTATTGATATCTATTTGAGTGATGGAGATAACTGGATGTTCGCAGGCCATGAAGTGCATATATTGGCCACACCTGGTCACACCGAAGgtcacatttatagtctatttgcattagtaaatattcttgttgtctgctattagatatatgattaaaaccagctcagttttggcttgttactttggctctt...

Basic information

species Glycine max
transcript GLYMA11G13470.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192305332|gb|FG997570.1|FG997570
EST:     TCACACCGAAG                         GTCATGTAAGCTTCTACTTTCCGGGTTCTGGGGCAATTTTTACCGGAGACA
genomic: TCACACCGAAGgtcacattta ... ctataagcagGTCATGTAAGCTTCTACTTTCCGGGTTCTGGGGCAATTTTTACCGGAGACA
EST: gi|9986135|gb|BE660243.1|BE660243
EST:     GTTCGCAGGCCATGAAGTGCATATATTGGCCACACCTGGTCACACCGAAG                         GTCATGTAAGCTTCTACTTTCCGGGTTCTGGGGCAATTTTTACCGGAGACA
genomic: GTTCGCAGGCCATGAAGTGCATATATTGGCCACACCTGGTCACACCGAAGgtcacattta ... ctataagcagGTCATGTAAGCTTCTACTTTCCGGGTTCTGGGGCAATTTTTACCGGAGACA
EST: gi|4290610|gb|AI441643.1|AI441643
EST:     GTTCGCAGGCCATGAAGTGCATATATTGGCCACACCTGGTCACACCGAAG                         GTCATGTAAGCTTCTACTTTCCGGGTTCTGGGGCAATTTTTACCGGAGACA
genomic: GTTCGCAGGCCATGAAGTGCATATATTGGCCACACCTGGTCACACCGAAGgtcacattta ... ctataagcagGTCATGTAAGCTTCTACTTTCCGGGTTCTGGGGCAATTTTTACCGGAGACA