1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
ACAAGTTGCGGGAATTAGCTTGGAGTGGTGTTCCAGACAATATGCGTCCTAAAGTGTGGAGACTTCTGTTGgtaagctctatggccttcatctatttctctggctctagctcatgcctccgatggtagttcttacttcttattcatacaaagtgcaacgataaggagcttt...
species | Glycine max |
transcript | GLYMA11G13330.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GGAGTGGTGTTCCAGACAATATGCGTCCTAAAGTGTGGAGACTTCTGTTG GGATATGTACCACCTAATTCAGATAGAAGGGAGGGAGTTCTAAGAAGGAAGEST: gi|120529818|gb|EH257952.1|EH257952
genomic: GGAGTGGTGTTCCAGACAATATGCGTCCTAAAGTGTGGAGACTTCTGTTGgtaagctcta ... ctgacaacagGGATATGCACCACCTAATTCAGATAGAAGGGAGGGAGTTCTAAGAAGGAAG
EST: GGAGTGGTG-TCCAGACAATATGCGTCCTAAAGTGTGGAGACTTCTGTTG GGATATGCACCACCTAATTCAGATAGAAGGGAGGGAGTTCTAAGAAGGAAAEST: gi|22525828|gb|BU084639.1|BU084639
genomic: GGAGTGGTGTTCCAGACAATATGCGTCCTAAAGTGTGGAGACTTCTGTTGgtaagctcta ... ctgacaacagGGATATGCACCACCTAATTCAGATAGAAGGGAGGGAGTTCTAAGAAGGAAG
EST: GGAGTGGTGTTCCAGACAATATGCGTCCTAAAGTGTGGAGACTTCTGTTG GGATATGCACCACCTAATTCAGATAGAAGGGAGGGAGTTCTAAGAAGGAAGEST: gi|31561508|gb|CD487346.1|CD487346
genomic: GGAGTGGTGTTCCAGACAATATGCGTCCTAAAGTGTGGAGACTTCTGTTGgtaagctcta ... ctgacaacagGGATATGCACCACCTAATTCAGATAGAAGGGAGGGAGTTCTAAGAAGGAAG
EST: GGAGTGGTGTTCCAGACAATATGCGTCCTAAAGTGTGGAGACTTCTGTTG GGATATGCACCACCTAATTCAGATAGAAGGGAGGGAGTTCTAAGAAGGAAG
genomic: GGAGTGGTGTTCCAGACAATATGCGTCCTAAAGTGTGGAGACTTCTGTTGgtaagctcta ... ctgacaacagGGATATGCACCACCTAATTCAGATAGAAGGGAGGGAGTTCTAAGAAGGAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACAAGTTGCGGGAATTAGCTTGGAGTGGTGTTCCAGACAATATGCGTCCTAAAGTGTGGAGACTTCTGTTGgtaagctctatggccttcatctatttctctggctctagctcatgcctccgatggtagttcttacttcttattcatacaaagtgcaacgataaggagcttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA