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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGGCTTAAAAGCTTCAGCAAACATGCTAGGGAACTTGTTACTCGCCTTCAGAAGATTGACGGTGACAACTATCCAGAGgtatttttttagtttttgtactatggttgaatttttattttgaatgaatcatggattactgagtaatattatgttcttgattgcttcattgcag

Basic information

species Glycine max
transcript GLYMA11G07660.1
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA11G07660.1 (Glycine max), 5'ss of exon 4
lower sequence: GRMZM2G162461_T01 (Zea mays), 5'ss of exon 6
GGGCTTAAAAGCTTCAGCAAACATGCTAGGGAACTTGTTACTCGCCTTCAGAAGATTGACGGTGACAACTATCCAGAGgta-tttttttagtttttgtactatggttgaatttttattttgaatgaatcatggattactgagtaatattatgttcttgattgcttcattgcag------
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GGGATGAAGCAATTCAGTAAAGCTGCAAGGGAGCTCATTGGCATGCTTCAGAAGATTGATGGTGACAATTATCCAGAGgtaatccctttgatatgtgttttgccttcagacattttatctgaattttgtaagcaatattgt-tcttaccatgccagtttttcttctcttttggtgctag