1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
AATCAAAGAAAGAAGGAAGAATTGTTAATGTTTCCTCAGAGGCTCACCGATTTGCATATTCTGAAGGAATCCGTTTTAACAAAATTAATGATGAATCAAGgtaatatgtaacctaaattcaatttatggcaagatatgctggcagttttttttatctttctattttttaatgtaagatgaactggaaggaaggcttgtgc...
species | Glycine max |
transcript | GLYMA10G37760.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TTTGCATATTCTGAAGGAATCCGTTTTAACAAAATTAATGATGAATCAAG TTACAACAACTGGCGTGCATATGGGCAGTCAAAGCTCGCCAACATTTTACAEST: gi|209724402|gb|BW658171.1|BW658171
genomic: TTTGCATATTCTGAAGGAATCCGTTTTAACAAAATTAATGATGAATCAAGgtaatatgta ... ttgatttcagTTACAACAACTGGCGTGCATATGGGCAGTCAAAGCTCGCCAACATTTTACA
EST: TTTGCATATTCTGAAGGAATCCGTTTTAACAAAATTAATGATGAATCAAG TTACAACAACTGGCGTGCATATGGGCAGTCAAAGCTCGCCAACATTTTACAEST: gi|57575920|gb|CX548891.1|CX548891
genomic: TTTGCATATTCTGAAGGAATCCGTTTTAACAAAATTAATGATGAATCAAGgtaatatgta ... ttgatttcagTTACAACAACTGGCGTGCATATGGGCAGTCAAAGCTCGCCAACATTTTACA
EST: TTTGCATATTCTGAAGGAATCCGTTTTAACAAAATTAATGATGAATCAAG TTACAACAACTGGCGTGCATATGGGCAGTCAAAGCTCGCCAACATTTTACAEST: gi|208241444|gb|GE043242.1|GE043242
genomic: TTTGCATATTCTGAAGGAATCCGTTTTAACAAAATTAATGATGAATCAAGgtaatatgta ... ttgatttcagTTACAACAACTGGCGTGCATATGGGCAGTCAAAGCTCGCCAACATTTTACA
EST: TTGCATATTCTGAAGGAATCCGTTTTAAACAAAATTAATGATGAATCAAG TTACAACAACTGGCGTGCATATGGGCAGTCAAAGCTCGCCAACATTTTACAEST: gi|58024590|gb|CX711331.1|CX711331
genomic: TTGCATATTCTGAAGGAATCCGTTTTAA-CAAAATTAATGATGAATCAAGgtaatatgta ... ttgatttcagTTACAACAACTGGCGTGCATATGGGCAGTCAAAGCTCGCCAACATTTTACA
EST: TTTGCATATTCTGAAGGAATCCGTTTTAACAAAATTAATGATGAATCAAG TTACAACAACTGGCGTGCATATGGGCAGTCAAAGCTCGCCAACATTTTACAEST: gi|58024332|gb|CX711073.1|CX711073
genomic: TTTGCATATTCTGAAGGAATCCGTTTTAACAAAATTAATGATGAATCAAGgtaatatgta ... ttgatttcagTTACAACAACTGGCGTGCATATGGGCAGTCAAAGCTCGCCAACATTTTACA
EST: TTTGCATATTCTGAAGGAATCCGTTTTAACAAAATTAATGATGAATCAAG TTACAACAACTGGCGTGCATATGGGCAGTCAAAGCTCGCCAACATTTTACAEST: gi|192304811|gb|FG996027.1|FG996027
genomic: TTTGCATATTCTGAAGGAATCCGTTTTAACAAAATTAATGATGAATCAAGgtaatatgta ... ttgatttcagTTACAACAACTGGCGTGCATATGGGCAGTCAAAGCTCGCCAACATTTTACA
EST: TTTGCATATTCTGAAGGAATCCGTTTTAACAAAATTAATGATGAATCAAG TTACAACAACTGGCGTGCATATGGGCAGTCAAAGCTCGCCAACATTTTACAEST: gi|58021522|gb|CX708263.1|CX708263
genomic: TTTGCATATTCTGAAGGAATCCGTTTTAACAAAATTAATGATGAATCAAGgtaatatgta ... ttgatttcagTTACAACAACTGGCGTGCATATGGGCAGTCAAAGCTCGCCAACATTTTACA
EST: TTTGCATATTCTGAAGGAATCCGTTTTAACAAAATTAATGATGAATCAAG TTACAACAACTGGCGTGCATATGGGCAGTCAAAGCTCGCCAACATTTTACA
genomic: TTTGCATATTCTGAAGGAATCCGTTTTAACAAAATTAATGATGAATCAAGgtaatatgta ... ttgatttcagTTACAACAACTGGCGTGCATATGGGCAGTCAAAGCTCGCCAACATTTTACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AATCAAAGAAAGAAGGAAGAATTGTTAATGTTTCCTCAGAGGCTCACCGATTTGCATATTCTGAAGGAATCCGTTTTAACAAAATTAATGATGAATCAAGgtaatatgtaacctaaattcaatttatggcaagatatgctggcagttttttttatctttctattttttaatgtaagatgaactggaaggaaggcttgtgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA