1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
ATATCCTATCCGGCAATAGAGAGCCATGAGTGGCAAATTGTGACTGGTTGTGATCCCAAAAATACCAGATGGAGTTACCATAATGGAGGATCTTGGCCAGgttcttcctttctgctcacatattcaaactttaaaatgcatttaacgtggggtttggtcttgctagctttttcacttgatttggttatttgggtattgac...
species | Glycine max |
transcript | GLYMA10G35890.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TGATCCCAAAAATACCAGATGGAGTTACCATAATGGAGGATCTTGGCCAG TGCTCCTGTGGCTAGTAACAGCTGCTTGTATCAAAACGGGTAGACCACAGAEST: gi|208051604|gb|GD846001.1|GD846001
genomic: TGATCCCAAAAATACCAGATGGAGTTACCATAATGGAGGATCTTGGCCAGgttcttcctt ... ttgtgtgcagTGCTCCTGTGGCTAGTAACAGCTGCTTGTATCAAAACGGGTAGACCACAGA
EST: TGATCCCAAAAATACCAGATGGAGTTACCATAATGGAGGATCTTGGCCAG TGCTCCTGTGGCTAGTAACAGCTGCTTGTATCAAAACGGGTAGACCACAGAEST: gi|207805081|gb|GD778674.1|GD778674
genomic: TGATCCCAAAAATACCAGATGGAGTTACCATAATGGAGGATCTTGGCCAGgttcttcctt ... ttgtgtgcagTGCTCCTGTGGCTAGTAACAGCTGCTTGTATCAAAACGGGTAGACCACAGA
EST: AGTTACCATAATGGAGGATCTTGGCCAG TGCTCCTGTGGCTAGTAACAGCTGCTTGTATCAAAACGGGTAGACCACAGAEST: gi|13479349|gb|BG508692.1|BG508692
genomic: AGTTACCATAATGGAGGATCTTGGCCAGgttcttcctt ... ttgtgtgcagTGCTCCTGTGGCTAGTAACAGCTGCTTGTATCAAAACGGGTAGACCACAGA
EST: TGATCCCAAAAATACCAGATGGAGTTACCATAATGGAGGATCTTGGCCAG TGCTCCTGTGGCTAGTAACAGCTGCTTGTATCAAAACGGGTAGACCACAGAEST: gi|14260015|gb|BG882923.1|BG882923
genomic: TGATCCCAAAAATACCAGATGGAGTTACCATAATGGAGGATCTTGGCCAGgttcttcctt ... ttgtgtgcagTGCTCCTGTGGCTAGTAACAGCTGCTTGTATCAAAACGGGTAGACCACAGA
EST: TGATCCCAAAAATACCAGATGGAGTTACCATAATGGAGGATCTTGGCCAA TGCTCCTGTGGCTAGTAACAGCTGCTTGTATCAAAACGGGTAGAEST: gi|193471191|gb|FK436068.1|FK436068
genomic: TGATCCCAAAAATACCAGATGGAGTTACCATAATGGAGGATCTTGGCCAGgttcttcctt ... ttgtgtgcagTGCTCCTGTGGCTAGTAACAGCTGCTTGTATCAAAACGGGTAGA
EST: TGATCCCAAAAATACCAGATGGAGTTACCATAATGGAGGATCTTGGCCAG TGCTCCTGTGGCTAGTAACAGCTGCTTGTATCAAAACGGGTAGACCACAGAEST: gi|18040752|gb|BM309046.1|BM309046
genomic: TGATCCCAAAAATACCAGATGGAGTTACCATAATGGAGGATCTTGGCCAGgttcttcctt ... ttgtgtgcagTGCTCCTGTGGCTAGTAACAGCTGCTTGTATCAAAACGGGTAGACCACAGA
EST: TGATCCCAAAAATACCAGATGGAGTTACCATAATGGAGGATCTTGGCCAG TGCTCCTGTGGCTAGTAACAGCTGCTTGTATCAAAACGGGTAGACCACAGA
genomic: TGATCCCAAAAATACCAGATGGAGTTACCATAATGGAGGATCTTGGCCAGgttcttcctt ... ttgtgtgcagTGCTCCTGTGGCTAGTAACAGCTGCTTGTATCAAAACGGGTAGACCACAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATATCCTATCCGGCAATAGAGAGCCATGAGTGGCAAATTGTGACTGGTTGTGATCCCAAAAATACCAGATGGAGTTACCATAATGGAGGATCTTGGCCAGgttcttcctttctgctcacatattcaaactttaaaatgcatttaacgtggggtttggtcttgctagctttttcacttgatttggttatttgggtattgac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT