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GCCTCAGGTTCTATACCAAGTGCAGACACAAGTAGTGCCGATAAGGAGGAAGAAAAGTCTGAGACATATAGTCATAACATGACAGAAGCCATGGGTGCTGgtaatctttttctgcttcttgttcaacaatgatgttgcctaatcctgctagatggagttgcaacattgatcaaacatcattaagccctaacagaaaccaa...
species | Glycine max |
transcript | GLYMA10G34370.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: AGAAAAGTCTGAGACATATAGTCATAACATGACAGAAGCCATGGGTGCTG TTTTGACTTATAGGCATGAATTAGGAATGAACTATAATTTCATCCGTCCAGEST: gi|192332512|gb|FK024273.1|FK024273
genomic: AGAAAAGTCTGAGACATATAGTCATAACATGACAGAAGCCATGGGTGCTGgtaatctttt ... tgcttcacagTTTTGACTTATAGGCATGAATTAGGAATGAACTATAATTTCATCCGTCCAG
EST: AGAAAAGTCTGAGACATATAGTCATAACATGACAGAAGCCATGGGTGCTG TTTTGACTTATAGGCATGAATTAGGAATGAACTATAATTTCATCCGTCCAGEST: gi|17022153|gb|BM093187.1|BM093187
genomic: AGAAAAGTCTGAGACATATAGTCATAACATGACAGAAGCCATGGGTGCTGgtaatctttt ... tgcttcacagTTTTGACTTATAGGCATGAATTAGGAATGAACTATAATTTCATCCGTCCAG
EST: AGAAAAGTCTGAGACATATAGTCATAACATGACAGAAGCCATGGGTGCTG TTTTGACTTATAGGCATGAATTAGGAATGAACTATAATTTCATCCGTCCAGEST: gi|26047793|gb|CA784466.1|CA784466
genomic: AGAAAAGTCTGAGACATATAGTCATAACATGACAGAAGCCATGGGTGCTGgtaatctttt ... tgcttcacagTTTTGACTTATAGGCATGAATTAGGAATGAACTATAATTTCATCCGTCCAG
EST: AGAAAAGTCTGAGACATATAGTCATAACATGACAGAAGCCATGGGTGCTG TTTTGACTTATAGGCATEST: gi|193463792|gb|FK427016.1|FK427016
genomic: AGAAAAGTCTGAGACATATAGTCATAACATGACAGAAGCCATGGGTGCTGgtaatctttt ... tgcttcacagTTTTGACTTATAGGCAT
EST: TGACAGAAGCCATGGGNGCTG TTTTGACTTATAGGCATGAATTAGGAATGAACTATAATTTCATCCGTCCAGEST: gi|213617950|gb|DB967312.1|DB967312
genomic: TGACAGAAGCCATGGGTGCTGgtaatctttt ... tgcttcacagTTTTGACTTATAGGCATGAATTAGGAATGAACTATAATTTCATCCGTCCAG
EST: AGAAAAGTCTGAGACATATAGTCATAACATGACAGAAGCCATNGGTGCTG TTTTGACTTATAGGCAEST: gi|10845400|gb|BF068537.1|BF068537
genomic: AGAAAAGTCTGAGACATATAGTCATAACATGACAGAAGCCATGGGTGCTGgtaatctttt ... tgcttcacagTTTTGACTTATAGGCA
EST: AGAAAAGTCTGAGACATATAGTCATAACATGACAGAAGCCATGGGTGCTG TTTTGACTTATAGGCATGAATTAGGAATGAACTATAATTTCATCCGTCCAGEST: gi|24205361|gb|BU964614.1|BU964614
genomic: AGAAAAGTCTGAGACATATAGTCATAACATGACAGAAGCCATGGGTGCTGgtaatctttt ... tgcttcacagTTTTGACTTATAGGCATGAATTAGGAATGAACTATAATTTCATCCGTCCAG
EST: AGAAAAGTCTGAGACATATAGTCATAACATGACAGAAGCCATGGGTGCTG TTTTGACTTATAGGCATGAATTAGGAATGAACTATAATTTCATCCGTCCAGEST: gi|209709966|gb|BW681009.1|BW681009
genomic: AGAAAAGTCTGAGACATATAGTCATAACATGACAGAAGCCATGGGTGCTGgtaatctttt ... tgcttcacagTTTTGACTTATAGGCATGAATTAGGAATGAACTATAATTTCATCCGTCCAG
EST: AGAAAAGTCTGAGACATATAGTCATAACATGACAGAAGCCATGGGTGCTG TTTTGACTTATAGGCATGAATTAGGAATGAACTATAATTTCATCCGTCCAGEST: gi|6916528|gb|AW398058.1|AW398058
genomic: AGAAAAGTCTGAGACATATAGTCATAACATGACAGAAGCCATGGGTGCTGgtaatctttt ... tgcttcacagTTTTGACTTATAGGCATGAATTAGGAATGAACTATAATTTCATCCGTCCAG
EST: TCATAGCATGACAGAAGCCATGGGTGCTG TTTTGACTTATAGGCATGAATTAGGAATGAACTATAATTTCATCCGTCCAGEST: gi|7589574|gb|AW705345.1|AW705345
genomic: TCATAACATGACAGAAGCCATGGGTGCTGgtaatctttt ... tgcttcacagTTTTGACTTATAGGCATGAATTAGGAATGAACTATAATTTCATCCGTCCAG
EST: AGAAAAGTCTGAGACATATAGTCATAACATGACAGAAGCCATGGGTGCTG TTTTGACTTATAGGCATGAATTAGGAATGAACTATAATTTCATCCGTCCAG
genomic: AGAAAAGTCTGAGACATATAGTCATAACATGACAGAAGCCATGGGTGCTGgtaatctttt ... tgcttcacagTTTTGACTTATAGGCATGAATTAGGAATGAACTATAATTTCATCCGTCCAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCCTCAGGTTCTATACCAAGTGCAGACACAAGTAGTGCCGATAAGGAGGAAGAAAAGTCTGAGACATATAGTCATAACATGACAGAAGCCATGGGTGCTGgtaatctttttctgcttcttgttcaacaatgatgttgcctaatcctgctagatggagttgcaacattgatcaaacatcattaagccctaacagaaaccaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aacagaaa