1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GACATTTACAAACCTCATCGATATATGGGCAAAAGAAGTTGAGCGTTATTCAACTAATCATGGTAGCATCAAAATTCTTGTTGGCAATAAGGTGGACAAGgtaaatattatagtgaatgggttagtcctttccttactcaggaaaagacaaacagaaaccatacagattatgctatttttttctcatactattctaattt...
species | Glycine max |
transcript | GLYMA10G34120.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CAACTAATCATGGTAGCATCAAAATTCTTGTTGGCAATAAGGTGGACAAG GATAGTGAAAGAGCTGTAAGCAAAGAAGAGGGTATGGCTCTTGCACAGCAAEST: gi|192300976|gb|FG987961.1|FG987961
genomic: CAACTAATCATGGTAGCATCAAAATTCTTGTTGGCAATAAGGTGGACAAGgtaaatatta ... aacttttcagGATAGTGAAAGAGCTGTAAGCAAAGAAGAGGGTATGGCTCTTGCACAGCAA
EST: CAACTAATCATGGTAGCATCAAAATTCTTGTTGGCAATAAGGTGGACAAG GATAGTGAAAGAGCTGTAAGCAAAGAA
genomic: CAACTAATCATGGTAGCATCAAAATTCTTGTTGGCAATAAGGTGGACAAGgtaaatatta ... aacttttcagGATAGTGAAAGAGCTGTAAGCAAAGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GACATTTACAAACCTCATCGATATATGGGCAAAAGAAGTTGAGCGTTATTCAACTAATCATGGTAGCATCAAAATTCTTGTTGGCAATAAGGTGGACAAGgtaaatattatagtgaatgggttagtcctttccttactcaggaaaagacaaacagaaaccatacagattatgctatttttttctcatactattctaattt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cctttcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggaaaaga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aacagaaa