1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
ATTTAAAGATTTTCCACCTTCAGCACTGCCCCTTATTGACACTCTTCTTGCAATTGATCCTGCAGAACGGAAGAGTGCCACAGATGCTCTAAGAAGTGAGgtgggcttttgaaaattcctgatttgttattgatattattatttcatgctacttagagatctattggatccagatctattctcagggtacatagattgcc...
species | Glycine max |
transcript | GLYMA10G30030.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CACAGATGCTCTAAGAAGTGAG TTCTTTACCACAGAACCTTATGCTTGTGATCCTTCTAGTCTTCCAAAATATEST: gi|151407586|gb|EV277401.1|EV277401
genomic: CACAGATGCTCTAAGAAGTGAGgtgggctttt ... caatttgcagTTCTTTACCACAGAACCTTATGCTTGTGATCCTTCTAGTCTTCCAAAATAT
EST: CAATTGATCCTGCAGAACGGAAGAGTGCCACAGATGCTCTAAGAAGTGAG TTCTTTACCACAGAACCTTATGCTTGTGATCCTTCTAGTCTTCCAAAATATEST: gi|9820068|gb|BE555581.1|BE555581
genomic: CAATTGATCCTGCAGAACGGAAGAGTGCCACAGATGCTCTAAGAAGTGAGgtgggctttt ... caatttgcagTTCTTTACCACAGAACCTTATGCTTGTGATCCTTCTAGTCTTCCAAAATAT
EST: CAATTGATCCTGCAGAACGGAAGAGTGCCACAGATGCTCTAAGAAGTGAG TTCTTTACCACAGAACCTTATGCTTGTGATCCTTCTAGTCTTCCAAAATAT
genomic: CAATTGATCCTGCAGAACGGAAGAGTGCCACAGATGCTCTAAGAAGTGAGgtgggctttt ... caatttgcagTTCTTTACCACAGAACCTTATGCTTGTGATCCTTCTAGTCTTCCAAAATAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTTAAAGATTTTCCACCTTCAGCACTGCCCCTTATTGACACTCTTCTTGCAATTGATCCTGCAGAACGGAAGAGTGCCACAGATGCTCTAAGAAGTGAGgtgggcttttgaaaattcctgatttgttattgatattattatttcatgctacttagagatctattggatccagatctattctcagggtacatagattgcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT