1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
ACTATAAGCTACATGGCAGAGCGTGTTGTAGGGCATGGATCATTTGGAGTTGTCTTCCAGgtaaaatttccagttgactaaaagagatgcatttctttagccttttcaacacaagtgacataattattgccttagttctgacattgggtgtgattgtag
species | Glycine max |
transcript | GLYMA10G28530.2 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: ACATGGCAGAGCGTGTTGTAGGGCATGGATCATTTGGAGTTGTCTTCCAG GCTAAGTGCTTGGAAACTGGTGAAACTGTGGCEST: gi|23726962|gb|BU761494.1|BU761494
genomic: ACATGGCAGAGCGTGTTGTAGGGCATGGATCATTTGGAGTTGTCTTCCAGgtaaaatttc ... gtgattgtagGCTAAGTGCTTGGAAACTGGTGAAACTGTGGC
EST: ACATGGCAGAGCGTGTTGTAGGGCATGGATCATTTGGAGTTGTCTTCCAG GCTAAGTGCTTGGAAACTGGTGAAACTGTGGCTATCAAAAAGGTTCTTCAAEST: gi|298194802|gb|HO043274.1|HO043274
genomic: ACATGGCAGAGCGTGTTGTAGGGCATGGATCATTTGGAGTTGTCTTCCAGgtaaaatttc ... gtgattgtagGCTAAGTGCTTGGAAACTGGTGAAACTGTGGCTATCAAAAAGGTTCTTCAA
EST: ACATGGCAGAGCGTGTTGTAGGGCATGGATCATTTGGAGTTGTCTTCCAG GCTAAGTGCTTGGAAACTGGTGAAACTGTGGCTATCAAAAAGGTTCCTCAAEST: gi|254344095|gb|GR851005.1|GR851005
genomic: ACATGGCAGAGCGTGTTGTAGGGCATGGATCATTTGGAGTTGTCTTCCAGgtaaaatttc ... gtgattgtagGCTAAGTGCTTGGAAACTGGTGAAACTGTGGCTATCAAAAAGGTTCTTCAA
EST: ACATGGCAGAGCGTGTTGTAGGGCATGGATCATTTGGAGTTGTCTTCCAG GCTAAGTGCTTGGAAACTGGTGAAACTGTGGCTATCAAAAAGGTTCTTCAAEST: gi|21602288|gb|BQ612619.1|BQ612619
genomic: ACATGGCAGAGCGTGTTGTAGGGCATGGATCATTTGGAGTTGTCTTCCAGgtaaaatttc ... gtgattgtagGCTAAGTGCTTGGAAACTGGTGAAACTGTGGCTATCAAAAAGGTTCTTCAA
EST: ACATGGCAGAGCGTGTTGTAGGGCATGGATCATTTGGAGTTGTCTTCCAG GCTAAGTGCTTGGAAACTGGTGAAACTGTG
genomic: ACATGGCAGAGCGTGTTGTAGGGCATGGATCATTTGGAGTTGTCTTCCAGgtaaaatttc ... gtgattgtagGCTAAGTGCTTGGAAACTGGTGAAACTGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTATAAGCTACATGGCAGAGCGTGTTGTAGGGCATGGATCATTTGGAGTTGTCTTCCAGgtaaaatttccagttgactaaaagagatgcatttctttagccttttcaacacaagtgacataattattgccttagttctgacattgggtgtgattgtag
- - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - TTGGAG