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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTTCCGAACCAAGGTATTTCACCCTAACATAAACAGCAATGGAAGTATCTGTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggctttatacgtgtcattttccttgcctaacttcaccaatttgttttcttgatgatttaatgcatcagtagatccttgaactttttaggaattt...

Basic information

species Glycine max
transcript GLYMA10G18310.1
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA10G18310.1 (Glycine max), 5'ss of exon 4
lower sequence: LOC_Os04g57220.1 (Oryza sativa), 5'ss of exon 4
CTTCCGAACCAAGGTATTTCACCCTAACATAAACAGCAATGGAAGTATCTGTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggctttatacgtgtcattttccttgcctaacttcaccaatttgtt-ttcttgatgatttaatgcatcagtagatccttgaactttttaggaattt
 ||||| |||||||| || ||||| ||||| || |||||||| || || || || ||||| || || || |||||||||||||| |||||  | || |||||| |      |||  |  | |  |   ||    |  ||  ||  | |||    | |||||| ||     |||| ||  ||    |               
TTTCCGCACCAAGGTTTTCCACCCGAACATTAATAGCAATGGCAGCATTTGCCTCGACATCCTCAAGGAACAGTGGAGTCCTGCACTTACCATATCAAAGgtaat------tatcagcatgacctgatttcaacattttggcccttctgtgacacctgatgaattgtgttatcattaattctaacag--------------

upper sequence: GLYMA10G18310.1 (Glycine max), 5'ss of exon 4
lower sequence: GRMZM2G102471_T03 (Zea mays), 5'ss of exon 3
CTTCCGAACCAAGGTATTTCACCCTAACATAAACAGCAATGGAAGTATCTGTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtat----taggctttatacgtgtcattt-tccttgcctaacttca--ccaatttgttttcttgatgatttaatgcatcagtagatccttgaactttttaggaattt
 ||||| |||||||| || ||||| ||||| |||||||| || || || || || |||||||| || || ||||||||||||||  | ||  | || ||||||     |   | || |   | |  |   | || ||   |||     |||  |   |     || | ||| | || | | |     ||  | |     |       
TTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGCATTTGCCTTGACATTCTTAAGGAACAGTGGAGTCCTGCTTTAACTATCTCAAAGgtaaattgtctacattgtttatattgtgagttctggctgcactctgatccacctgaatcctccgaggttttgaggccttacttttggctccaccccaaca-------

upper sequence: GLYMA10G18310.1 (Glycine max), 5'ss of exon 4
lower sequence: GRMZM2G102471_T05 (Zea mays), 5'ss of exon 4
-----CTTCCGAACCAAGGTATTTCACCCTAACATAAACAGCAATGGAAGTATCTGTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggctttatacgtgtcattttccttgcctaacttcaccaatttgttttcttgatgatttaatgcatcagtagatccttgaactttttaggaattt---
      ||||| |||||||| || ||||| ||||| |||||||| || || || || || |||||||| || || ||||||||||||||  | ||  | || ||||||       || |     |  |||   |||  | | |||       ||   |||     |  | |  | || |  | |    |  |||  |      |    
GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGCATTTGCCTTGACATTCTTAAGGAACAGTGGAGTCCTGCTTTAACTATctcaaaggtaaa-----ttgtctacattgtttatattg--tgagttct---ggctgcactctgatccacctgaatcctccgaggttttgaggccttacttttggctccac

upper sequence: GLYMA10G18310.1 (Glycine max), 5'ss of exon 4
lower sequence: AT5G56150.2 (Arabidopsis thaliana), 5'ss of exon 4
CTTCCGAACCAAGGTATTTCACCCTAACATAAACAGCAATGGAAGTATCTGTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggctttatacgtgtcattttccttgcctaacttcaccaatttgttttct-tgatgatttaatgcatcagtagatccttgaactttttaggaattt
|||||| |||||||| | |||||| ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| || ||||||||  |    ||  | |   ||  || | ||     |   ||  | | | |||||    |    ||  ||   |  |   |   | || |  | | |  || 
CTTCCGGACCAAGGTTTATCACCCAAACATCAACAGTAATGGAAGTATCTGTCTTGACATTCTGAAAGAGCAGTGGAGCCCTGCACTTACCGTATCCAAGgtgatcaaattgtttcacttc-cttactttttagtatagcattagtctattttccaccacaccttcttgtgaccatgtcttagttaaatggtcatgtctta

upper sequence: GLYMA10G18310.1 (Glycine max), 5'ss of exon 4
lower sequence: Vv19s0015g01190.t01 (Vitis vinifera), 5'ss of exon 4
CTTCCGAACCAAGGTATTTCACCCTAACATAAACAGCAATGGAAGTATCTGTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggctttatacgtgtcattttccttgcctaacttcaccaatttgttttcttgatgatttaatgcatcagtagatccttgaactttttaggaattt---
|||| |||| ||||| || ||||| ||||| ||||||||||| || ||||| || || || ||||||||||||||||| |||||||| ||| | ||||||||| |  || |  |   |  |||||   ||    |  |    |  || ||| |  | || |  |  |  || |      |  |  ||||   |||        
CTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGCATCTGCCTTGATATCCTGAAAGAGCAGTGGAGCCCTGCCCTCACAATATCCAAGgtaatttgcatctttaata-catttaatttataaagatgtttcccttagttgt--tcataagatggtaaatgaaccttactgtatacttccaaggtcccactt

upper sequence: GLYMA10G18310.1 (Glycine max), 5'ss of exon 4
lower sequence: EDO98738 (Chlamydomonas reinhardtii), 5'ss of exon 4
CTTCCGAACCAAGGTATTTCACCCTAACATAAACAGCAATGGAAGTATCTGTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgta--ttaggctttatacgtgtcattttccttgcctaacttcaccaatttgttttcttgatgatttaatgcatcagtagatccttgaactttttaggaattt-
             || |  ||||| ||| | |||||| | || || ||||| ||||||||||| ||||| |||||||| |||||||| ||  |||||||||||  | | ||      || |      | | || |   | ||  ||    |    |  ||   |  ||||   | | | | |           | |  |    
-------------GTGTACCACCCCAACGTGAACAGCCAGGGCAGCATCTGCCTGGACATTCTCAAAGACCAGTGGAGCCCTGCCCTGACCATTTCCAAGgtaagtcaagcgccg-gcgggcgggacttcatggcattcatcggcagcaggcc--caggacattacaatgttgcgggaaagcgggaggtgccctggtgaccgc

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|9819671|gb|BE555184.1|BE555184
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|15001120|gb|BI321934.1|BI321934
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|151405165|gb|EV274979.1|EV274979
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|19269376|gb|BM885632.1|BM885632
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|192333375|gb|FK024352.1|FK024352
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|5760252|gb|AI965615.1|AI965615
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|16347704|gb|BI973299.1|BI973299
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|8403230|gb|BE058864.1|BE058864
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|37995518|gb|CF807107.1|CF807107
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|16996965|gb|BM086337.1|BM086337
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|33387783|gb|CA850990.1|CA850990
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|298198640|gb|HO040179.1|HO040179
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|10234967|gb|BE803855.1|BE803855
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|120493582|gb|EH221749.1|EH221749
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|21676962|gb|BQ629313.1|BQ629313
EST:     AAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: AAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|7590752|gb|AW706424.1|AW706424
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|308098911|gb|HO760752.1|HO760752
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCCGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|24136559|gb|BU927069.1|BU927069
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|209697761|gb|BW663913.1|BW663913
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|192313043|gb|FK004661.1|FK004661
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|192333374|gb|FK024351.1|FK024351
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|14126317|gb|BG790755.1|BG790755
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|209697762|gb|BW663914.1|BW663914
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|19453541|gb|BM954951.1|BM954951
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|192313044|gb|FK004662.1|FK004662
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|31307888|gb|CD393091.1|CD393091
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|192322601|gb|FK014722.1|FK014722
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|33387822|gb|CA851029.1|CA851029
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
EST: gi|22525311|gb|BU084122.1|BU084122
EST:     GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAG                         GTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT
genomic: GTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggct ... tttgttgtagGTGCTACTTTCAATTTGCTCCCTGCTGACAGATCCCAACCCGGATGATCCT

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CTTCCGAACCAAGGTATTTCACCCTAACATAAACAGCAATGGAAGTATCTGTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTTCCAAGgtattaggctttatacgtgtcattttccttgcctaacttcaccaatttgttttcttgatgatttaatgcatcagtagatccttgaactttttaggaattt

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG