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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTTACTCCAGGTCCATTGTCGGTGCCACTTTGGAAGTTATCCAGAAAAAGAGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgtttttgttttttgtctctgcatactctgtttggattcggctcttacattggaggataaagtacagttataattattaataagaaaataattggcc...

Basic information

species Glycine max
transcript GLYMA10G07680.1
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA10G07680.1 (Glycine max), 5'ss of exon 4
lower sequence: LOC_Os07g12250.1 (Oryza sativa), 5'ss of exon 5
CTTACTCCAGGTCCATTGTCGGTGCCACTTTGGAAGTTATCCAGAAAAAGAGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgtttttgttttttgtctctg---catactctgtttggattcggctcttacattggaggataaagtacagttataattattaataagaaaataattggcc
| |||||| |||| || || ||||| ||  | ||||| |||||||| |||||||||||||||||||| ||||| ||||||   |||||| | || ||||||| || | || | |    ||||||    ||    | |||  |  |   || |  || |      | |   ||   ||   | | ||  | |   | ||    |
CGTACTCCCGGTCTATAGTTGGTGCTACCCTTGAAGTCATCCAGAAGAAGAGAGCTGAGAAGCCAGAGGTTCGTGATGCAGCAAGGGAATCCGCTCTTCGgtatgctattctatgccatctctggtttatggattcttttaacaccattcatgtatggatttgaagaagcca---atgcatttcaaccacattctcatcttac

upper sequence: GLYMA10G07680.1 (Glycine max), 5'ss of exon 4
lower sequence: LOC_Os05g40820.3 (Oryza sativa), 5'ss of exon 5
CTTACTCCAGGTCCATTGTCGGTGCCACTTTGGAAGTTATCCAGAAAAAGAGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgtttttgttttttgtctctgcatactctgtttggat-tcggctcttac-----attggaggataaagtacagttataattattaataagaaaataattggcc
| ||||| ||||| ||||| |||||  | |||||||| ||||| || ||||||||||| ||||| |||||||| |||||   ||| |||||||| ||||||| || | ||    |   |   |||  | |  |  ||| |   || ||  ||     ||      ||  | || |    |     |  ||| |      ||     
CATACTCTAGGTCAATTGTTGGTGCTTCGTTGGAAGTCATCCAAAAGAAGAGAGCTGAAAAGCCTGAAGTTCGTGATGCTGCTAGAGAAGCTGCTCTTCGgtatgctctttccctgaatgattgc-catttagactggttactggttccaacaaagtatccacccatggaatagaacattgccactctatatgggttacat-----

upper sequence: GLYMA10G07680.1 (Glycine max), 5'ss of exon 4
lower sequence: GRMZM2G074898_T01 (Zea mays), 5'ss of exon 5
CTTACTCCAGGTCCATTGTCGGTGCCACTTTGGAAGTTATCCAGAAAAAGAGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtg-tgtttttgttttttgtctctgcatactctgtttggattcggctcttacattggag-----gataaagtacagttataattattaataagaaaataattggcc----------------------------------
| ||||| ||||||||||| |||||  | |||||||| |||||||| ||||||||||||||||| ||||| ||||||||   ||| |||||||| |||||||  |||||   |  |   | | |     || ||   | |     |  |    |||| |      ||||| | | ||| |  |    | |   |   ||      |                                  
CATACTCGAGGTCCATTGTGGGTGCTTCCTTGGAAGTGATCCAGAAGAAGAGAGCTGAGAAGCCTGAAGTCCGAGATGCTGCTAGAGAAGCTGCTCTTCGgtaatgtttacatcctccatttatatgc-ctatgacagcagctaaccatctgtttggtgttgccaataaaat-ctgttttgctctcgagtgttactgtacacaaacgtgcaatacatttgaactgccgctgaccttacag

upper sequence: GLYMA10G07680.1 (Glycine max), 5'ss of exon 4
lower sequence: GRMZM2G142640_T03 (Zea mays), 5'ss of exon 4
CTTACTCCAGGTCCATTGTCGGTGCCACTTTGGAAGTTATCCAGAAAAAGAGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgtttttgttttttgtctctgcatactctgtttggattcggctcttacattggaggataaagtacagttataattattaataagaaaataattggcc
| ||||||||||| ||||| |||||  | |||||||| |||||||| |||||||||||||||||||| || || |||||   ||| |||||||| ||||||| ||| |     || | | |   ||||     |    |          | |           | |  |  | |  | |  |   ||             
CATACTCCAGGTCAATTGTGGGTGCTTCCTTGGAAGTAATCCAGAAGAAGAGAGCTGAGAAGCCAGAGGTCCGCGATGCTGCTAGAGAAGCTGCTCTTCGgtatgtctgccagttctatattaccataacaaatagataccgatgctcaatacctctccgctcatttgaactgtcgtgaccatgcag-------------

upper sequence: GLYMA10G07680.1 (Glycine max), 5'ss of exon 4
lower sequence: AT2G36620.1 (Arabidopsis thaliana), 5'ss of exon 4
CTTACTCCAGGTCCATTGTCGGTGCCACTTTGGAAGTTATCCAGAAAAAGAGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgtttttgttttttgtctctgcatactctgtttggattcggctcttacattggaggataaagtacagttataattattaataagaaaataattggcc--
||||||| ||||| ||||||||||| |||||||| ||||| ||||| ||| |||| |||||||| |||||||| |||||   ||| ||||||||||| |||| |||||     |||        ||  | || | |  ||     | ||   || ||   | || |    ||  | | |    |||    || |||   |  
CTTACTCAAGGTCGATTGTCGGTGCTACTTTGGAGGTTATTCAGAAGAAGCGAGCAGAGAAGCCTGAAGTTCGTGATGCCGCTAGAGAAGCTGCCCTACGgtttgttt----ctttcccgaagacagtcactatatacatcaatttttt---tttgaaactgaaatgtgattg-attcaaagctaatctgatgattatgcag

upper sequence: GLYMA10G07680.1 (Glycine max), 5'ss of exon 4
lower sequence: AT3G53020.1 (Arabidopsis thaliana), 5'ss of exon 4
CTTACTCCAGGTCCATTGTCGGTGCCACTTTGGAAGTTATCCAGAAAAAGAGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgtttttgttttttgtctctgcatactctgtttggattcggctc-ttacattggaggataaagtacagttataattattaataagaaaataattggcc
| ||||| ||||||||||| ||||| || |||||||| || ||||| ||||||||||||||||| |||||||| ||||||   ||||||||||| || ||||  |||||     | ||||    |||   |   | |||||    |  ||| ||| ||    | |      || | || || | | |  ||| |       
CATACTCAAGGTCCATTGTTGGTGCTACCTTGGAAGTAATTCAGAAGAAGAGAGCTGAGAAGCCTGAAGTTCGTGATGCAGCCAGGGAAGCTGCTCTGCGgttagttttctccctctgtcaaatcat--ccaactaggattaaaatagttatatttgacttaataaatgtattgtgatgatgattcaacaaacag------

upper sequence: GLYMA10G07680.1 (Glycine max), 5'ss of exon 4
lower sequence: Vv08s0007g04210.t01 (Vitis vinifera), 5'ss of exon 4
CTTACTCCAGGTCCATTGTCGGTGCCACTTTGGAAGTTATCCAGAAAAAGAGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgtttttgtttt--ttgtctctgcatactctgtttggattcggctcttacattggaggataaagtacagttataattattaataagaaaataattggcc
| ||||| ||||||||||| ||||| || ||||| ||||||||||| |  ||| | |||||  |||||||  |||||||    ||||| ||||| ||||||||||||||||||    ||||   |||  ||    |    || |  ||  ||| |    |  |      || |  ||||   |  || | || ||     | 
CCTACTCTAGGTCCATTGTGGGTGCTACATTGGAGGTTATCCAGAAGAGAAGAACCGAGAAAGCAGAAGTCAGAGATGCTGCCAGGGAGGCTGCTCTTCGgtgtgtttttgttgcacttgtgattgctaacctgataattatgctccttatacctaattgtttttgtctcaatagtaatcggtt-tatgcaattagaacac-

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|9204099|gb|BE330323.1|BE330323
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|6848156|gb|AW350446.1|AW350446
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|209729426|gb|BW663687.1|BW663687
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|213610359|gb|DB976761.1|DB976761
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|298178215|gb|HO023950.1|HO023950
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|192311451|gb|FK005182.1|FK005182
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|298184907|gb|HO030120.1|HO030120
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|254338509|gb|GR849927.1|GR849927
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|209725927|gb|BW654752.1|BW654752
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|298170088|gb|HO018712.1|HO018712
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|209717027|gb|BW682315.1|BW682315
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|254338510|gb|GR849928.1|GR849928
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|31472739|gb|CD414767.1|CD414767
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|209725928|gb|BW654753.1|BW654753
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|254330682|gb|GR841947.1|GR841947
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|254326104|gb|GR840696.1|GR840696
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|298174457|gb|HO014602.1|HO014602
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|21594271|gb|BQ610109.1|BQ610109
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|308097945|gb|HO761116.1|HO761116
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|254319112|gb|GR828840.1|GR828840
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|213612145|gb|DB976806.1|DB976806
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|58015011|gb|CX701753.1|CX701753
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|254327330|gb|GR836939.1|GR836939
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|209712106|gb|BW676723.1|BW676723
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|38193719|gb|CF922925.1|CF922925
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|208061423|gb|GD860117.1|GD860117
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|298191792|gb|HO035874.1|HO035874
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|57574313|gb|CX547288.1|CX547288
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|254331670|gb|GR846087.1|GR846087
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|192327707|gb|FK020698.1|FK020698
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|151409976|gb|EV279784.1|EV279784
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|193658045|gb|FK601988.1|FK601988
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|193682903|gb|FK625051.1|FK625051
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|38192454|gb|CF921660.1|CF921660
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|209717026|gb|BW682314.1|BW682314
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|213616688|gb|DB971227.1|DB971227
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|19452701|gb|BM954111.1|BM954111
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|254330683|gb|GR841948.1|GR841948
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|151411689|gb|EV281500.1|EV281500
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|13791093|gb|BG653684.1|BG653684
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|41146259|gb|CK606470.1|CK606470
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|193562311|gb|FK517330.1|FK517330
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAAGA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAA-GA
EST: gi|9203421|gb|BE329574.1|BE329574
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAGATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|17400652|gb|BM177434.1|BM177434
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|10709290|gb|BF009014.1|BF009014
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|193634766|gb|FK583911.1|FK583911
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|120532385|gb|EH260518.1|EH260518
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|192311450|gb|FK005181.1|FK005181
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|209729425|gb|BW663686.1|BW663686
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|209713440|gb|BW681481.1|BW681481
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|9986848|gb|BE660956.1|BE660956
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|41145786|gb|CK605997.1|CK605997
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|4396328|gb|AI495325.1|AI495325
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|209713439|gb|BW681480.1|BW681480
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|209712105|gb|BW676722.1|BW676722
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|11414163|gb|BF426174.1|BF426174
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|213603022|gb|DB958593.1|DB958593
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|23732092|gb|BU764201.1|BU764201
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|298179313|gb|HO027784.1|HO027784
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|7042350|gb|AW472244.1|AW472244
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|213607624|gb|DB958643.1|DB958643
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|58025017|gb|CX711758.1|CX711758
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|120532494|gb|EH260627.1|EH260627
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|208084891|gb|GD881089.1|GD881089
EST:     AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|26267866|gb|CA818929.1|CA818929
EST:     AGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: gi|298187108|gb|HO034257.1|HO034257
EST:     AGAGCTGGGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG                         TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CTTACTCCAGGTCCATTGTCGGTGCCACTTTGGAAGTTATCCAGAAAAAGAGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgtttttgttttttgtctctgcatactctgtttggattcggctcttacattggaggataaagtacagttataattattaataagaaaataattggcc

- - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaaaataa