1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GTGGTTGAAATTGGGAAAGGAAGTAAGGTGAAATATGAACTTGACAAAAGAACTGGTCTTATTATGgtaatcatcgctgcctagttttttcttcccttgtcgcacttgttgctacaggatattgctgaacaggcatctatgtgcag
species | Glycine max |
transcript | GLYMA10G05130.2 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: AAGGAAGTAAGGTGAAATATGAACTTGACAAAAGAACTGGTCTTATTATG GTTGATCGTATCCTTTACTCATCGGTTGTGTATCCTCACAACTATGGGTTTEST: gi|192334513|gb|FK024472.1|FK024472
genomic: AAGGAAGTAAGGTGAAATATGAACTTGACAAAAGAACTGGTCTTATTATGgtaatcatcg ... ctatgtgcagGTTGATCGTATCCTTTACTCATCGGTTGTGTATCCTCACAACTATGGGTTT
EST: AAGGAAGTAAGGTGAAATATGAACTTGACAAAAGAACTGGTCTTATTATG GTTGATCGTATCCTTTACTCATCGGTTGTGTATCCTCACAACTATGGGTTTEST: gi|192331411|gb|FK022716.1|FK022716
genomic: AAGGAAGTAAGGTGAAATATGAACTTGACAAAAGAACTGGTCTTATTATGgtaatcatcg ... ctatgtgcagGTTGATCGTATCCTTTACTCATCGGTTGTGTATCCTCACAACTATGGGTTT
EST: AAGGAAGTAAGGTGAAATATGAACTTGACAAAAGAACTGGTCTTATTATG GTTGATCGTATCCTTTACTCATCGGTTGTGTATCCTCACAACTATGGGTTT
genomic: AAGGAAGTAAGGTGAAATATGAACTTGACAAAAGAACTGGTCTTATTATGgtaatcatcg ... ctatgtgcagGTTGATCGTATCCTTTACTCATCGGTTGTGTATCCTCACAACTATGGGTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGGTTGAAATTGGGAAAGGAAGTAAGGTGAAATATGAACTTGACAAAAGAACTGGTCTTATTATGgtaatcatcgctgcctagttttttcttcccttgtcgcacttgttgctacaggatattgctgaacaggcatctatgtgcag
- - - - - - - - AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - AAGAAC