1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
AGGGGAATCTTCTGGGGTTCACAAGGCGGTTGAACTTGTTGCAATTCATCTACGTAAATTCTTGGTTGATCGCAGCATAGTTGGAGTATTTGAAACACAAgtgagttcattttatttttaatttgaacactccaagctatataagaaatgatgttttcaagcttgggttatatttggggatagttgaatgggataggtta...
species | Glycine max |
transcript | GLYMA10G03910.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TACGTAAATTCTTGGTTGATCGCAGCATAGTTGGAGTATTTGAAACACAA ATGCAAAGGCCAGATGTTCGAGCAAACCAGAATGTGCCACCAGGCCCACCAEST: gi|9902211|gb|BE611179.1|BE611179
genomic: TACGTAAATTCTTGGTTGATCGCAGCATAGTTGGAGTATTTGAAACACAAgtgagttcat ... aaaacttcagATGCAAAGGCCAGATGTTCGAGCAAACCAGAATGTGCCACCAGGCCCACCA
EST: TACGTAAATTCTTGGTTGATCGCAGCATAGTTGGAGTATTTGAAACACAA ATGCAAAGGCCAGATGTTCGAGCAAACCAGAATGTGCCACCAGGCCCACCAEST: gi|51337757|gb|CO981623.1|CO981623
genomic: TACGTAAATTCTTGGTTGATCGCAGCATAGTTGGAGTATTTGAAACACAAgtgagttcat ... aaaacttcagATGCAAAGGCCAGATGTTCGAGCAAACCAGAATGTGCCACCAGGCCCACCA
EST: TACGTAAATTCTTGGTTGATCGCAGCATAGTTGGAGTATTTGAAACACAA ATGCAAAGGCCAGATGTTCGAGCAAACCAGAATGTGCCACCAGGCCCACCAEST: gi|18734549|gb|BM528247.1|BM528247
genomic: TACGTAAATTCTTGGTTGATCGCAGCATAGTTGGAGTATTTGAAACACAAgtgagttcat ... aaaacttcagATGCAAAGGCCAGATGTTCGAGCAAACCAGAATGTGCCACCAGGCCCACCA
EST: TACGTAAATTCTTGGTTGATCGCAGCATAGTTGGAGTATTTGAAACACTA ATGCAAAGGCCAGATGTTCGAGCAAACCAGAATGTGCCACCAGGCCCACCAEST: gi|254323298|gb|GR840103.1|GR840103
genomic: TACGTAAATTCTTGGTTGATCGCAGCATAGTTGGAGTATTTGAAACACAAgtgagttcat ... aaaacttcagATGCAAAGGCCAGATGTTCGAGCAAACCAGAATGTGCCACCAGGCCCACCA
EST: TACGTAAATTCTTGGTTGATCGCAGCATAGTTGGAGTATTTGAAACACAA ATGCAAAGGCCAGATGTTCGAGCAAACCAGAATGTGCCACCAGGCCCACCA
genomic: TACGTAAATTCTTGGTTGATCGCAGCATAGTTGGAGTATTTGAAACACAAgtgagttcat ... aaaacttcagATGCAAAGGCCAGATGTTCGAGCAAACCAGAATGTGCCACCAGGCCCACCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGGGGAATCTTCTGGGGTTCACAAGGCGGTTGAACTTGTTGCAATTCATCTACGTAAATTCTTGGTTGATCGCAGCATAGTTGGAGTATTTGAAACACAAgtgagttcattttatttttaatttgaacactccaagctatataagaaatgatgttttcaagcttgggttatatttggggatagttgaatgggataggtta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG