1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ACAGATAGAGCTGCCATGCTGGACGAAATTGTGGATTATGTCAAGTTCTTGAGGCTTCAAGTGAAGgttaatgctcttgtgatctgcatggatttcatatttcgtttcatttgatttttgttcttattaggtctcagtttataattaatggcagcttctagtttga...
species | Glycine max |
transcript | GLYMA10G03690.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TGCTGGACGAAATTGTGGATTATGTCAAGTTCTTGAGGCTTCAAGTGAAG GTTTTGAGCATGAGTAGATTGGGTGGAGCTGGTGCAGTGGCACCACTGGTAEST: gi|192322439|gb|FK014920.1|FK014920
genomic: TGCTGGACGAAATTGTGGATTATGTCAAGTTCTTGAGGCTTCAAGTGAAGgttaatgctc ... tgcctttcagGTTTTGAGCATGAGTAGATTGGGTGGAGCTGGTGCAGTGGCACCACTGGTA
EST: TGCTGGACGAAATTGTGGATTATGTCAAGTTCTTGAGGCTTCAAGTGAAG GTTTTGAGCATGAGTAGATTGGGTGGAGCTGGTGCAGTGGCACCACTGGTAEST: gi|21601666|gb|BQ611997.1|BQ611997
genomic: TGCTGGACGAAATTGTGGATTATGTCAAGTTCTTGAGGCTTCAAGTGAAGgttaatgctc ... tgcctttcagGTTTTGAGCATGAGTAGATTGGGTGGAGCTGGTGCAGTGGCACCACTGGTA
EST: TGGACGAAATTGTGGATTATGTCAAGTTCTTGAGGCTTCAAGTGAAG GTTTTGAGCATGAGTAGATTGGGTGGAGCTGGTGCAGTGGCACCACTGGTA
genomic: TGGACGAAATTGTGGATTATGTCAAGTTCTTGAGGCTTCAAGTGAAGgttaatgctc ... tgcctttcagGTTTTGAGCATGAGTAGATTGGGTGGAGCTGGTGCAGTGGCACCACTGGTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACAGATAGAGCTGCCATGCTGGACGAAATTGTGGATTATGTCAAGTTCTTGAGGCTTCAAGTGAAGgttaatgctcttgtgatctgcatggatttcatatttcgtttcatttgatttttgttcttattaggtctcagtttataattaatggcagcttctagtttga
- - - - - - - - GCTGGA