1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
AAACAGCTTGGCTGCAAAACAAATCCATTGTCTTATGACATTACAGCTGCATGTAGTGGATTTGTGTTGGGTTTAATATCAGCTGCTTGCCACATTAGGGgtatgaattggctatttttgttgtcttgataattcctaaatatgttgaaaatcattgccctttattgtgtgagttcag
species | Glycine max |
transcript | GLYMA09G41380.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: ATGTAGTGGATTTGTGTTGGGTTTAATATCAGCTGCTTGCCACATTAGGG GAGGTGGGTTTAATAATGTTCTAGTTATTGGGGCGGATGCTCTTTCACGATEST: gi|192330256|gb|FK020556.1|FK020556
genomic: ATGTAGTGGATTTGTGTTGGGTTTAATATCAGCTGCTTGCCACATTAGGGgtatgaattg ... gtgagttcagGAGGTGGGTTTAATAATGTTCTAGTTATTGGGGCGGATGCTCTTTCACGAT
EST: ATGTAGTGGATTTGTGTTGGGTTTAATATCAGCTGCTTGCCACATTAGGG GAGGTGGGTTTAATAATGTTCTAGTTATTGGGGCGGATGCTCTTTCACGAT
genomic: ATGTAGTGGATTTGTGTTGGGTTTAATATCAGCTGCTTGCCACATTAGGGgtatgaattg ... gtgagttcagGAGGTGGGTTTAATAATGTTCTAGTTATTGGGGCGGATGCTCTTTCACGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAACAGCTTGGCTGCAAAACAAATCCATTGTCTTATGACATTACAGCTGCATGTAGTGGATTTGTGTTGGGTTTAATATCAGCTGCTTGCCACATTAGGGgtatgaattggctatttttgttgtcttgataattcctaaatatgttgaaaatcattgccctttattgtgtgagttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT