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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAACTCTTGATTCATTGATGgtacgttgtttcactgattgctctcataatttgtcccattttttttttctcagcatgctctaatcctcaaatttgcttttatgtacttcag

Basic information

species Glycine max
transcript GLYMA09G36070.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|9564549|gb|BE474058.1|BE474058
EST:     TAAAGGAACTCTTGATTCATTGATG                         TGTGGTACTGATGCTCCAATTAGTGCTGCTCAGATGCTTGCTGAAGTTTGT
genomic: TAAAGGAACTCTTGATTCATTGATGgtacgttgtt ... tgtacttcagTGTGGTACTGATGCTCCAATTAGTGCTGCTCAGATGCTTGCTGAAGTTTGT
EST: gi|192330142|gb|FK019782.1|FK019782
EST:     TAAAGGAACTCTTGATTCATTGATG                         TGTGGTACTGATGCTCCAATTAGTGCTGCTCAGATGCTTGCTGAAGTTTGT
genomic: TAAAGGAACTCTTGATTCATTGATGgtacgttgtt ... tgtacttcagTGTGGTACTGATGCTCCAATTAGTGCTGCTCAGATGCTTGCTGAAGTTTGT