1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GCCTACAATATTTGAGGTTGTAACTGGATCTGCAAAGAAACAGACAAAGGAGAAGTCATCAGAGAACAATGGCAACAAATCAAAGTCCAGTTCAAAAGGGgtaagaaaaacatcttgttacatctgcacatccttgtatttttctgggtttttttaaaatcatttttaatatcataattgtactatttattgctcatgct...
species | Glycine max |
transcript | GLYMA09G07970.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: AGAAGTCATCAGGGAACAATGGCAACAAATCAAAGTCCAGTTCAAAAGGG CGAGGATCTGAACCCCCAAAGTATEST: gi|151412383|gb|EV282195.1|EV282195
genomic: AGAAGTCATCAGAGAACAATGGCAACAAATCAAAGTCCAGTTCAAAAGGGgtaagaaaaa ... ataaaaatagCGAGGATCTGAACCCCCAAAGTAT
EST: AGAAGTCATCAGAGAACAATGGCAACAAATCAAAGTCCAGTTCAAAAGGG CGAGGATCTGAACCCCCAAAGTATTCAAAGCAAGTGAAGGATGAGGAGGAGEST: gi|192323928|gb|FK018649.1|FK018649
genomic: AGAAGTCATCAGAGAACAATGGCAACAAATCAAAGTCCAGTTCAAAAGGGgtaagaaaaa ... ataaaaatagCGAGGATCTGAACCCCCAAAGTATTCAAAGCAAGTGAAGGATGAGGAGGAG
EST: AGAAGTCATCAGAGAACAATGGCAACAAATCAAAGTCCAGTTCAAAAGGG CGAGGATCTGAACCCCCAAAGTATTCAAAGCAAGTGAAGGATGAGGAGGGAEST: gi|192299703|gb|FG990027.1|FG990027
genomic: AGAAGTCATCAGAGAACAATGGCAACAAATCAAAGTCCAGTTCAAAAGGGgtaagaaaaa ... ataaaaatagCGAGGATCTGAACCCCCAAAGTATTCAAAGCAAGTGAAGGATGAGGAGG-A
EST: AGAAGTCATCAGAGAACAATGGCAACAAATCAAAGTCCAGTTCAAAAGGG CGAGGATCTGAACCCCCAAAGTATTCAAAGCAAGTGAAGGATGAGGAGGAGEST: gi|192327024|gb|FK015206.1|FK015206
genomic: AGAAGTCATCAGAGAACAATGGCAACAAATCAAAGTCCAGTTCAAAAGGGgtaagaaaaa ... ataaaaatagCGAGGATCTGAACCCCCAAAGTATTCAAAGCAAGTGAAGGATGAGGAGGAG
EST: AGAAGTCATCAGAGAACAATGGCAACAAATCAAAGTCCAGTTCAAAAGGG CGAGGATCTGAACCCCCAAAGTATTCAAAGCAAGTGAAGGATGAGGAGGAGEST: gi|12689413|gb|BG155810.1|BG155810
genomic: AGAAGTCATCAGAGAACAATGGCAACAAATCAAAGTCCAGTTCAAAAGGGgtaagaaaaa ... ataaaaatagCGAGGATCTGAACCCCCAAAGTATTCAAAGCAAGTGAAGGATGAGGAGGAG
EST: AGAAGTCATCAGAGAACAATGGCAACAAATCAAAGTCCAGTTCAAAAGGG CGAGGATCTGAACCCCCAAEST: gi|208271013|gb|GE069937.1|GE069937
genomic: AGAAGTCATCAGAGAACAATGGCAACAAATCAAAGTCCAGTTCAAAAGGGgtaagaaaaa ... ataaaaatagCGAGGATCTGAACCCCCAA
EST: AGAAGTCATCAGAGAACAATGGCAACAAATCAAAGTCCAGTTCAAAAGGG CGAGGATCTGAACCCCCAAAGTATTCAAAGCAAGTGAAGGATGAGGAGGAGEST: gi|151401139|gb|EV270953.1|EV270953
genomic: AGAAGTCATCAGAGAACAATGGCAACAAATCAAAGTCCAGTTCAAAAGGGgtaagaaaaa ... ataaaaatagCGAGGATCTGAACCCCCAAAGTATTCAAAGCAAGTGAAGGATGAGGAGGAG
EST: AGAAGTCATCAGAGAACAATGGCAACAAATCAAAGTCCAGTTCAAAAGGG CGAGGACCTGAACCCCCAAAGTATTCAAAGCAAGTGAAGGATGAGGAGGAGEST: gi|151411128|gb|EV280939.1|EV280939
genomic: AGAAGTCATCAGAGAACAATGGCAACAAATCAAAGTCCAGTTCAAAAGGGgtaagaaaaa ... ataaaaatagCGAGGATCTGAACCCCCAAAGTATTCAAAGCAAGTGAAGGATGAGGAGGAG
EST: AGAAGTCATCAGAGAACAATGGCAACAAATCAAAGTCCAGTTCAAAAGGG CGAGGATCTGAACCCCCAAAGTATTCAAAGCAAGTGAAGGATGAGGAGGAG
genomic: AGAAGTCATCAGAGAACAATGGCAACAAATCAAAGTCCAGTTCAAAAGGGgtaagaaaaa ... ataaaaatagCGAGGATCTGAACCCCCAAAGTATTCAAAGCAAGTGAAGGATGAGGAGGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCCTACAATATTTGAGGTTGTAACTGGATCTGCAAAGAAACAGACAAAGGAGAAGTCATCAGAGAACAATGGCAACAAATCAAAGTCCAGTTCAAAAGGGgtaagaaaaacatcttgttacatctgcacatccttgtatttttctgggtttttttaaaatcatttttaatatcataattgtactatttattgctcatgct
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