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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTGCTGTTGGGGACTACACCGATTTCTTTACGTCTCTGCATCACACTAAAAACTGTGGGATCATATTTCGTGGGCCGCAGACTCCTGTTCTAGATAACTGgtgtgttgatttaaaaggctttacaaataaacttgagcaattttttctgtaactaaaaggttaaacttgtattgcag

Basic information

species Glycine max
transcript GLYMA09G01270.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|18692857|gb|BM521705.1|BM521705
EST:     AACTGTGGGATCATATTTCGTGGGCCGCAGACTCCTGTTCTAGATAACTG                         GTATCGCCTGCCTGNTGCCTACCATGGACGGGCA
genomic: AACTGTGGGATCATATTTCGTGGGCCGCAGACTCCTGTTCTAGATAACTGgtgtgttgat ... tgtattgcagGTATCGCCTGCCTGTTGCCTACCATGGACGGGCA
EST: gi|254346898|gb|GR856620.1|GR856620
EST:     AACTGTGGGATCATATTTCGTGGGCCACAGACTCCTGTTCTAGATAACTG                         GTATCGCCTGCCTGTTGCCTACCATGGACGGGCATCTTCTGTTGTTATTTC
genomic: AACTGTGGGATCATATTTCGTGGGCCGCAGACTCCTGTTCTAGATAACTGgtgtgttgat ... tgtattgcagGTATCGCCTGCCTGTTGCCTACCATGGACGGGCATCTTCTGTTGTTATTTC
EST: gi|6567242|gb|AW234853.1|AW234853
EST:     CGTGGGCCGCAGACTCCTGTTCTAGATAACTG                         GTATCGCCTGCCTGTTGCCTACCATGGACGGGCATCTTCTGTTGTTATTTC
genomic: CGTGGGCCGCAGACTCCTGTTCTAGATAACTGgtgtgttgat ... tgtattgcagGTATCGCCTGCCTGTTGCCTACCATGGACGGGCATCTTCTGTTGTTATTTC
EST: gi|213601975|gb|DB976222.1|DB976222
EST:     AACTGTGGGATCATATTTCGTGGGCCGCAGACTCCTGTTCTAGATAACTG                         GTATCGCCTGCCTGTTGCCTACCATGGACGGGCATCTTCTGTTGTTATTTC
genomic: AACTGTGGGATCATATTTCGTGGGCCGCAGACTCCTGTTCTAGATAACTGgtgtgttgat ... tgtattgcagGTATCGCCTGCCTGTTGCCTACCATGGACGGGCATCTTCTGTTGTTATTTC
EST: gi|151410471|gb|EV280286.1|EV280286
EST:     AACTGTGGGATCATATTTCGTGGGCCGCAGACTCCTGTTCTAGATAACTG                         GTATCGCCTGCCTGTTGCCTACCATGGACGGGCATCTTCTGTTGTTATTTC
genomic: AACTGTGGGATCATATTTCGTGGGCCGCAGACTCCTGTTCTAGATAACTGgtgtgttgat ... tgtattgcagGTATCGCCTGCCTGTTGCCTACCATGGACGGGCATCTTCTGTTGTTATTTC
EST: gi|7924174|gb|AW830200.1|AW830200
EST:     AACTGTGGGATCATATTTCGTGGGCCGCAGACTCCTGTTCTAGATAACTG                         GTATCGCCTGCCTGTTGCCTACCATGGACGGGCATCTTCTGTTGTTATTTC
genomic: AACTGTGGGATCATATTTCGTGGGCCGCAGACTCCTGTTCTAGATAACTGgtgtgttgat ... tgtattgcagGTATCGCCTGCCTGTTGCCTACCATGGACGGGCATCTTCTGTTGTTATTTC
EST: gi|15664491|gb|BI701862.1|BI701862
EST:     AACTGTGGGATCATATTTCGTGGGCCGCAGACTCCTGTTCTAGATAACTG                         GTATCGCCTGCCTGTTGCCTACCATGGACGGGCATCTTCTGTTGTTATTTC
genomic: AACTGTGGGATCATATTTCGTGGGCCGCAGACTCCTGTTCTAGATAACTGgtgtgttgat ... tgtattgcagGTATCGCCTGCCTGTTGCCTACCATGGACGGGCATCTTCTGTTGTTATTTC
EST: gi|192327116|gb|FK015508.1|FK015508
EST:     AACTGTGGGATCATATTTCGTGGGCCGCAGACTCCTGTTCTAGATAACTG                         GTATCGCCTGCCTGTTGTCTACCATGGACGGGCATCTTCTGTTGTTATTTC
genomic: AACTGTGGGATCATATTTCGTGGGCCGCAGACTCCTGTTCTAGATAACTGgtgtgttgat ... tgtattgcagGTATCGCCTGCCTGTTGCCTACCATGGACGGGCATCTTCTGTTGTTATTTC