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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCAATGAAAATCCACTGGCTTCGGTGATTGGGAGGCTAGGTCTACCCCTTTACCGTACTAGTGGGGATAATTCCATACTCTATGACCATGATTTGGAAAGgtaagtatattagatttttttgctctattaatttctactccaattgcgtagtataagattatttcaaatattattttggcaactatcttgcatgctggaaattactaaatgatagttccttttgattgaaattcatcaacttcttgcag

Basic information

species Glycine max
transcript GLYMA08G41570.3
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298163510|gb|HO012243.1|HO012243
EST:     TACCGTACTAGTGGGGATAATTCCATACTCTATGACCATGATTTGGAAAG                         CTATGGACTTTTTGATATGGATGGGAAACAGGTTCCTCAAGAGTTGGTAGC
genomic: TACCGTACTAGTGGGGATAATTCCATACTCTATGACCATGATTTGGAAAGgtaagtatat ... cttcttgcagCTATGGACTTTTTGATATGGATGGGAAACAGGTTCCTCAAGAGTTGGTAGC
EST: gi|7673728|gb|AW160135.1|AW160135
EST:     TACCGTACTAGTGGGGATAATTCCATACTCTATGACCATGATTTGGAAAG                         CTATGGACTTTTTGATATGGATGGGAAACAGGTTCCTCAAGAGTTGGTAGC
genomic: TACCGTACTAGTGGGGATAATTCCATACTCTATGACCATGATTTGGAAAGgtaagtatat ... cttcttgcagCTATGGACTTTTTGATATGGATGGGAAACAGGTTCCTCAAGAGTTGGTAGC