1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
AATGTGACCATATCATCTCCTGGGGACAGTCCTAACACAGATGGAATTCACCTTCAGAACTCCAAAGATGTGTTAATATACGGCAGCACCATGGCCTGCGgtaatatttcatgaagttatggaaaatttccatttcatttgaacattcatactgcaatgtgggagatagggacacaagttaaaacgaaaatgaaagttaa...
species | Glycine max |
transcript | GLYMA08G39340.2 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CCTTCAGAACTCCAAAGATGTGTTAATATACGGCAGCACCATGGCCTGCG GAGATGACTGTATTTCGATACAAACTGGATGCTCGAACGTATACGTACACAEST: gi|193562329|gb|FK517348.1|FK517348
genomic: CCTTCAGAACTCCAAAGATGTGTTAATATACGGCAGCACCATGGCCTGCGgtaatatttc ... tattttgcagGAGATGACTGTATTTCGATACAAACTGGATGCTCGAACGTATACGTACACA
EST: CCTTNAGAACTCCAAAGATGTGTTAATATACGGCAGCACCATGGCCTGCG GAGATGACTGTATTTCGATACAAACTGGATGCTCGAACGTNTACGTACACEST: gi|193426830|gb|FK397459.1|FK397459
genomic: CCTTCAGAACTCCAAAGATGTGTTAATATACGGCAGCACCATGGCCTGCGgtaatatttc ... tattttgcagGAGATGACTGTATTTCGATACAAACTGGATGCTCGAACGTATACGTACAC
EST: GTTAATATACGGCAGCACCATGGCCTGCG GAGATGACTGTATTTCGATACAAACTGGATGCTCGAACGTATACGTACACAEST: gi|208299132|gb|GE100507.1|GE100507
genomic: GTTAATATACGGCAGCACCATGGCCTGCGgtaatatttc ... tattttgcagGAGATGACTGTATTTCGATACAAACTGGATGCTCGAACGTATACGTACACA
EST: AAAGATGTGTTAATATACGGCAGCACCATGGCCTGCG GAGATGACTGTATTTCGATACAAACTGGATGCTCGAACGTATACGTACACA
genomic: AAAGATGTGTTAATATACGGCAGCACCATGGCCTGCGgtaatatttc ... tattttgcagGAGATGACTGTATTTCGATACAAACTGGATGCTCGAACGTATACGTACACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AATGTGACCATATCATCTCCTGGGGACAGTCCTAACACAGATGGAATTCACCTTCAGAACTCCAAAGATGTGTTAATATACGGCAGCACCATGGCCTGCGgtaatatttcatgaagttatggaaaatttccatttcatttgaacattcatactgcaatgtgggagatagggacacaagttaaaacgaaaatgaaagttaa
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