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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGTCTCACTTTCATCTTTCTATAATGATACCCTTGTTCCCTGCCTAACATGTGCATGTGGCTGCCAAAGTAACTCATCTCAGTCAGGGACTTGTGTAGAgtaggtttccaccactcagtgtactgtgaattccttctagctactaagttgtgcactcatatatttcctttctgtgtggttacacag

Basic information

species Glycine max
transcript GLYMA08G27560.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151412694|gb|EV282506.1|EV282506
EST:     TGTGCATGTGGCTGCCAAAGTAACTCATCTCAGTCAGGGACTTGTGTAGA                         TCCAGATACACCACATTTGGCATCA
genomic: TGTGCATGTGGCTGCCAAAGTAACTCATCTCAGTCAGGGACTTGTGTAGAgtaggtttcc ... ggttacacagTCCAGATACACCACATTTGGCATCA
EST: gi|9566077|gb|BE475515.1|BE475515
EST:     TGTGCATGTGGCTGCCAAAGTAACTCATCTCAGTCAGGGACTTGTGTAGA                         TCCAGATACACCACATTTGGCATCAGTTGTTGCTGGCTCTGGGAAGAATAA
genomic: TGTGCATGTGGCTGCCAAAGTAACTCATCTCAGTCAGGGACTTGTGTAGAgtaggtttcc ... ggttacacagTCCAGATACACCACATTTGGCATCAGTTGTTGCTGGCTCTGGGAAGAATAA