1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GGTGCTTTTCAAGATACTTTAGAGGCAGAAACTCAGATATATGTATGTGACATTAACCCTAAGATGTTAAATGTTGGCAAACAGCGGGCCTCAGAGAAGGgtaaatgagaatgtcttaaactgtcaacaatttttcaatctttcataaagaattttggtttaatatatcttcatttgcaaggaatgaatattttctgcttattataatag
species | Glycine max |
transcript | GLYMA08G22890.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GCGGGCCTCAGAGAAGG GTTTTGGAGAAGATGGTTCCCTTGTATGGGTGGAGGGAAATGCTGAAAGCTEST: gi|6964108|gb|AW432801.1|AW432801
genomic: GCGGGCCTCAGAGAAGGgtaaatgaga ... attataatagGTTTTGGAGAAGATGGTTCCCTTGTATGGGTGGAGGGAAATGCTGAAAGCT
EST: CATTAACCCTAAGATGTTAAATGTTGGCAAACAGCGGGCCTCAGAGAAGG GTTTTGGAGAAGATGGTTCCCTTGTATGGGTGGAGGGAAATGCTGAAAGCTEST: gi|14990399|gb|BI316072.1|BI316072
genomic: CATTAACCCTAAGATGTTAAATGTTGGCAAACAGCGGGCCTCAGAGAAGGgtaaatgaga ... attataatagGTTTTGGAGAAGATGGTTCCCTTGTATGGGTGGAGGGAAATGCTGAAAGCT
EST: CATTAACCCTAAGATGTTAAATGTTGGCAAACAGCGGGCCTCATATAAGG GTTTTGGAGAAGATGGGTCCCTTGTATGGGTGGAGGGAAATGCTGAAAGCTEST: gi|151399502|gb|EV269373.1|EV269373
genomic: CATTAACCCTAAGATGTTAAATGTTGGCAAACAGCGGGCCTCAGAGAAGGgtaaatgaga ... attataatagGTTTTGGAGAAGATGGTTCCCTTGTATGGGTGGAGGGAAATGCTGAAAGCT
EST: CATTAACCCTAAGATGTTAAATGTTGGCAAACAGCGGGCCTCAGAGAAGG GTTTTGGAGAAGATGGTTCCCTTGTATGGGGTGGAGGGAAATGCTGAAAGCEST: gi|7458587|gb|AW666037.1|AW666037
genomic: CATTAACCCTAAGATGTTAAATGTTGGCAAACAGCGGGCCTCAGAGAAGGgtaaatgaga ... attataatagGTTTTGGAGAAGATGGTTCCCTTGTATGGG-TGGAGGGAAATGCTGAAAGC
EST: CATTAACCCTAAGATGTTAAATGTTGGCAAACAGCGGGCCTCAGAGAAGG GTTTTGGAGAAGATGGTTCCCTTGTATGGGTGGAGGGAAATGCTGAAAGCT
genomic: CATTAACCCTAAGATGTTAAATGTTGGCAAACAGCGGGCCTCAGAGAAGGgtaaatgaga ... attataatagGTTTTGGAGAAGATGGTTCCCTTGTATGGGTGGAGGGAAATGCTGAAAGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTGCTTTTCAAGATACTTTAGAGGCAGAAACTCAGATATATGTATGTGACATTAACCCTAAGATGTTAAATGTTGGCAAACAGCGGGCCTCAGAGAAGGgtaaatgagaatgtcttaaactgtcaacaatttttcaatctttcataaagaattttggtttaatatatcttcatttgcaaggaatgaatattttctgcttattataatag
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