1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
ACGACTTGTTTTGATTTCAGAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAAGACAAGCCCCACGAATGTCCAGTGTGCGCACAGTATTTTGTTgtaagttcataatgacttttagaatagcttctactgttacagtgtttttgtggggagagaatcaatgaatcattgtttagtatgtcttgttctgatactt...
species | Glycine max |
transcript | GLYMA08G22410.2 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TGGAGAAAGACAAGCCCCACGAATGTCCAGTGTGCGCACAGTATTTTGTT CTTGAAGTGGTAGGACCTGGTGGATCACCCGATGGGCATGGCGATGATGATEST: gi|31462980|gb|CD405008.1|CD405008
genomic: TGGAGAAAGACAAGCCCCACGAATGTCCAGTGTGCGCACAGTATTTTGTTgtaagttcat ... acaaaaacagCTTGAAGTGGTAGGACCTGGTGGATCACCCGATGGGCATGGCGATGATGAT
EST: TGGAGAAAGACAAGCCCCACGAATGTCCAGTGTGCGCACAGTATTTTGTT CTTGAAGTGGTAGGACCTGGTGGATCACCCGATGGGCATGGCGATGATGATEST: gi|193634000|gb|FK581108.1|FK581108
genomic: TGGAGAAAGACAAGCCCCACGAATGTCCAGTGTGCGCACAGTATTTTGTTgtaagttcat ... acaaaaacagCTTGAAGTGGTAGGACCTGGTGGATCACCCGATGGGCATGGCGATGATGAT
EST: TGGAGAAAGACAAGCCCCACGAATGTCCAGTGTGCGCACAGTATTTTGTT CTTGAAGTGGTAGGACCTGGTGGATCACCCGATGGGCATGGCGATGATGATEST: gi|193411396|gb|FK377187.1|FK377187
genomic: TGGAGAAAGACAAGCCCCACGAATGTCCAGTGTGCGCACAGTATTTTGTTgtaagttcat ... acaaaaacagCTTGAAGTGGTAGGACCTGGTGGATCACCCGATGGGCATGGCGATGATGAT
EST: CCACGAATGTCCAGTGTGCGCACAGTATTTTGTT CTTGAAGTGGTAGGACCTGGTGGATCACCCGATGGGCATGGCGATGATGATEST: gi|193366243|gb|FK330230.1|FK330230
genomic: CCACGAATGTCCAGTGTGCGCACAGTATTTTGTTgtaagttcat ... acaaaaacagCTTGAAGTGGTAGGACCTGGTGGATCACCCGATGGGCATGGCGATGATGAT
EST: CCACGAATGTCCAGTGTGCGCACAGTTATTTTGTT CTTGAAGTGGTAGGACCTGGTGGATCACCCGATGGGCATGGCGATGATGA
genomic: CCACGAATGTCCAGTGTGCGCACAG-TATTTTGTTgtaagttcat ... acaaaaacagCTTGAAGTGGTAGGACCTGGTGGATCACCCGATGGGCATGGCGATGATGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACGACTTGTTTTGATTTCAGAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAAGACAAGCCCCACGAATGTCCAGTGTGCGCACAGTATTTTGTTgtaagttcataatgacttttagaatagcttctactgttacagtgtttttgtggggagagaatcaatgaatcattgtttagtatgtcttgttctgatactt
- - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA