1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TCTTCCCCAACTTTCTATAGACCCTGTAATGGCTGCTACCAATGTCATTATTAGCTTACAAAACCTTGTTTCTCGCGAGGCTGATCCTCTTGACCCTCAGgtatatttggttcattcttatttttccattgtgagcttcatatttatacttattttatcctcattttaatgctaatatcaagaagtgtttacaatattct...
species | Glycine max |
transcript | GLYMA08G21080.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CTGATCCTCTTGACCCTCAG GTTTTGACAATTGCAAAGCTCCAAGGAGGTGATGCTTTCAATGTTATTCCAEST: gi|58014895|gb|CX701637.1|CX701637
genomic: CTGATCCTCTTGACCCTCAGgtatatttgg ... gtccccacagGTTTTGACAATTGCAAAGCTCCAAGGAGGTGATGCTTTCAATGTTATTCCA
EST: TTAGCTTACAAAACCTTGTTTCTCGCGAGGCTGATCCTCTTGACCNTCAG GTTTTGACAATTGCAAAGCTCCAAGGAGGTGATGCTTTCAATGTTATTCCAEST: gi|207785515|gb|GD757348.1|GD757348
genomic: TTAGCTTACAAAACCTTGTTTCTCGCGAGGCTGATCCTCTTGACCCTCAGgtatatttgg ... gtccccacagGTTTTGACAATTGCAAAGCTCCAAGGAGGTGATGCTTTCAATGTTATTCCA
EST: TTAGCTTACAAAACCTTGTTTCTCGCGAGGCTGATCCTCTTGACCCTCAG GTTTTGACAATTGCAAAGCTCCAAGGAGGTGATGCTTTCAATGTTATTCCAEST: gi|208110568|gb|GD913144.1|GD913144
genomic: TTAGCTTACAAAACCTTGTTTCTCGCGAGGCTGATCCTCTTGACCCTCAGgtatatttgg ... gtccccacagGTTTTGACAATTGCAAAGCTCCAAGGAGGTGATGCTTTCAATGTTATTCCA
EST: TTAGCTTACAAAACCTTGTTTCTCGCGAGGCTGATCCTCTTGACCCTCAG GTTTTGACAATTGCAAAGCTCCAAGGAGGTGATGCTTTCAATGTTATTCCAEST: gi|192294315|gb|FG987244.1|FG987244
genomic: TTAGCTTACAAAACCTTGTTTCTCGCGAGGCTGATCCTCTTGACCCTCAGgtatatttgg ... gtccccacagGTTTTGACAATTGCAAAGCTCCAAGGAGGTGATGCTTTCAATGTTATTCCA
EST: TTAGCTTACAAAACCTTGTTTCTCGCGAGGCTGATCCTCTTGACCCTCAG GTTTTGACAATTGCAAAGCTCCAAGGAGGTGATGCTTTCAATGTTATTCCA
genomic: TTAGCTTACAAAACCTTGTTTCTCGCGAGGCTGATCCTCTTGACCCTCAGgtatatttgg ... gtccccacagGTTTTGACAATTGCAAAGCTCCAAGGAGGTGATGCTTTCAATGTTATTCCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCTTCCCCAACTTTCTATAGACCCTGTAATGGCTGCTACCAATGTCATTATTAGCTTACAAAACCTTGTTTCTCGCGAGGCTGATCCTCTTGACCCTCAGgtatatttggttcattcttatttttccattgtgagcttcatatttatacttattttatcctcattttaatgctaatatcaagaagtgtttacaatattct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT