1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
GGAAATAGAAGAGAAAATTAACAAAATCAAATGGTGCCAAACAGCCAATGGTGCTTTGTTCCTTCTATCCACAAATGATAAAACCATCAAATTTTGGAAGgtatgaaatgaattctcacttgtgggatgctgaatgctatttttttattcaatttatatatgaatgacacacatggttacatttctgtcgaactaagttt...
species | Glycine max |
transcript | GLYMA08G20830.4 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GTGCTT-GTTCCTTCTATCCACAAATGATAAAACCATCAAATTTTGGAAG GTTCAAGAAAAGAAGGTCAAGAAAGTTTCAGACATGAATGTTGATCEST: gi|7690859|gb|AW758996.1|AW758996
genomic: GTGCTTTGTTCCTTCTATCCACAAATGATAAAACCATCAAATTTTGGAAGgtatgaaatg ... agttaaacagGTTCAAGAAAAGAAGGTCAAGAAAGTTTCAGACATGAATGTTGATC
EST: GTGCTTTGTTCCTTCTATCCACAAATGATAAAACCATCAAATTTTGGAAG GTTCAAGAAAAGAAGGTCAAGAAAGTTTCAGACATGAATGTTGATCCTAAAEST: gi|7796415|gb|AW781812.1|AW781812
genomic: GTGCTTTGTTCCTTCTATCCACAAATGATAAAACCATCAAATTTTGGAAGgtatgaaatg ... agttaaacagGTTCAAGAAAAGAAGGTCAAGAAAGTTTCAGACATGAATGTTGATCCTAAA
EST: GTGCTTTGTTCCTTCTATCCACAAATGATAAAACCATCAAATTTTGGAAG GTTCAAGAAAAGAAGGTCAAGAAAGTTTCAGACATGAATGTTGATCCTAAAEST: gi|193635750|gb|FK580343.1|FK580343
genomic: GTGCTTTGTTCCTTCTATCCACAAATGATAAAACCATCAAATTTTGGAAGgtatgaaatg ... agttaaacagGTTCAAGAAAAGAAGGTCAAGAAAGTTTCAGACATGAATGTTGATCCTAAA
EST: TGCTTTGTTCCTTCTATCCACAAATGAATAAAACCATCAAATTTTGGAAG GTTCAAAGAAAAGAAGGTCAAGAAAGTTTCAGACATGAATGTTGAEST: gi|308099093|gb|HO760934.1|HO760934
genomic: TGCTTTGTTCCTTCTATCCACAAATGA-TAAAACCATCAAATTTTGGAAGgtatgaaatg ... agttaaacagGTTCAA-GAAAAGAAGGTCAAGAAAGTTTCAGACATGAATGTTGA
EST: GTGCTTTGTTCCTTCTATCCACAAATGATAAAACCATCAAATTTTGGAAG GTTCAAGAAAAGAGGGTCAAGAAAGTTTCAGACATGAATGTTGATCCTAAA
genomic: GTGCTTTGTTCCTTCTATCCACAAATGATAAAACCATCAAATTTTGGAAGgtatgaaatg ... agttaaacagGTTCAAGAAAAGAAGGTCAAGAAAGTTTCAGACATGAATGTTGATCCTAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAAATAGAAGAGAAAATTAACAAAATCAAATGGTGCCAAACAGCCAATGGTGCTTTGTTCCTTCTATCCACAAATGATAAAACCATCAAATTTTGGAAGgtatgaaatgaattctcacttgtgggatgctgaatgctatttttttattcaatttatatatgaatgacacacatggttacatttctgtcgaactaagttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG