1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GTAGTGGAGCCTACGTGGTTATAGATAAAAGGTCCAAAGGAGAGCCTGATCTTCAGGGATCATCAAGTGAGGACGgtaatgttacttaattaagttcaatgcgaagtgtgtatattctgaaatgactatgatctagcttgttgccattttattgcatgcacccatagctaattgt...
species | Glycine max |
transcript | GLYMA08G20730.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TAAAAGGTCCAAAGGAGAGCCTGATCTTCAGGGATCATCAAGTGAGGACG GTGACAGCGACCCTGATGAACCATCAGACAGTGGCGACAEST: gi|192303971|gb|FG993843.1|FG993843
genomic: TAAAAGGTCCAAAGGAGAGCCTGATCTTCAGGGATCATCAAGTGAGGACGgtaatgttac ... ctacatttagGTGACAGCGACCCTGATGAACCATCAGACAGTGGCGACA
EST: TAAAAGGTCCAAAGGAGAGCCTGATCTTCAGGGATCATCAAGTGAGGACG GTGACAGCGACCCTGATGAACCATCAGACAGTGGCGACAACCAGGGTGATTEST: gi|298174672|gb|HO014703.1|HO014703
genomic: TAAAAGGTCCAAAGGAGAGCCTGATCTTCAGGGATCATCAAGTGAGGACGgtaatgttac ... ctacatttagGTGACAGCGACCCTGATGAACCATCAGACAGTGGCGACAACCAGGGTGATT
EST: TAAAAGGTCCAAAGGAGAGCCTGATCTTCAGGGATCATCAAGTGAGGACG GTGACAGCGACCCTGATGAACCATCAGACAGTGGCGACAACCAGGGTGATT
genomic: TAAAAGGTCCAAAGGAGAGCCTGATCTTCAGGGATCATCAAGTGAGGACGgtaatgttac ... ctacatttagGTGACAGCGACCCTGATGAACCATCAGACAGTGGCGACAACCAGGGTGATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTAGTGGAGCCTACGTGGTTATAGATAAAAGGTCCAAAGGAGAGCCTGATCTTCAGGGATCATCAAGTGAGGACGgtaatgttacttaattaagttcaatgcgaagtgtgtatattctgaaatgactatgatctagcttgttgccattttattgcatgcacccatagctaattgt
- - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - AGGAGA