1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TGTTATTGATGATTGTGTCCCTGCTCCATTATCAATGTTCAGTGAGAGTGATTCAGACATGAAATCCGTTAATATAGATGACTTGCTGCCCAAAGAAAAGgttgtttaccctttcattttatttcattatatttttttctgttttacaacttggtaaaaaaatttaattagctggtaaaaattattgattgaaatatgtc...
species | Glycine max |
transcript | GLYMA08G19150.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: ATTCAGACATGAAATCCGTTAATATAGATGACTTGCTGCCCAAAGAAAAG CTGCAGAGGAAGCTACCAAAGCCATCAGTGGGAAGGCGAAAAAACGGTTACEST: gi|27425750|gb|CA937270.1|CA937270
genomic: ATTCAGACATGAAATCCGTTAATATAGATGACTTGCTGCCCAAAGAAAAGgttgtttacc ... tgatttacagCTGCAGAGGAAGCTACCAAAGCCATCAGTGGGAAGGCGAAAAAACGGTTAC
EST: ATTCAGACATGAAATCCGTTAATATAGATGACTTGCTGCCCAAAGAAAAG CTGCAGAGGAAGCTACCAAAGCCATCAGTGGGAAGGCGAAAAAACGGTTACEST: gi|192299177|gb|FG990449.1|FG990449
genomic: ATTCAGACATGAAATCCGTTAATATAGATGACTTGCTGCCCAAAGAAAAGgttgtttacc ... tgatttacagCTGCAGAGGAAGCTACCAAAGCCATCAGTGGGAAGGCGAAAAAACGGTTAC
EST: ATTCAGACATGAAATCCGTTAATATAGATGACTTGCTGCCCAAAGAAAAG CTGCAGAGGAAGCTACCAAAGCCATCAGTGGGAAGGCGAAAAAACGGTTACEST: gi|19348427|gb|BM892959.1|BM892959
genomic: ATTCAGACATGAAATCCGTTAATATAGATGACTTGCTGCCCAAAGAAAAGgttgtttacc ... tgatttacagCTGCAGAGGAAGCTACCAAAGCCATCAGTGGGAAGGCGAAAAAACGGTTAC
EST: ATTCAGACATGAAATCCGTTAATATAGATGACTTGCTGCCCAAAGAAAAG CTGCAGAGGAAGCTACCAAAGCCATCAGTGGGAAGGCGAAAAAACGGTTACEST: gi|6482002|gb|AW201273.1|AW201273
genomic: ATTCAGACATGAAATCCGTTAATATAGATGACTTGCTGCCCAAAGAAAAGgttgtttacc ... tgatttacagCTGCAGAGGAAGCTACCAAAGCCATCAGTGGGAAGGCGAAAAAACGGTTAC
EST: CAGACATGAAATNCCGTTAATATNAGATGANCTTGCTGCCCAAAGAAAAG CTGCAGAGGAAGCTACCAAAGCCATCAGTGGGAAGGCGAAAAAACGGTTACEST: gi|207750621|gb|GD725652.1|GD725652
genomic: CAGACATGAAAT-CCGTTAATAT-AGATGA-CTTGCTGCCCAAAGAAAAGgttgtttacc ... tgatttacagCTGCAGAGGAAGCTACCAAAGCCATCAGTGGGAAGGCGAAAAAACGGTTAC
EST: ATTCAGACATGAAATCCGTTAATATAGATGACTTGCTGCCCAAAGAAAAG CTGCAGAGGAAGCTACCAAAGCCATCAGTGGGAAGGCGAAAAAACGGTTAC
genomic: ATTCAGACATGAAATCCGTTAATATAGATGACTTGCTGCCCAAAGAAAAGgttgtttacc ... tgatttacagCTGCAGAGGAAGCTACCAAAGCCATCAGTGGGAAGGCGAAAAAACGGTTAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTTATTGATGATTGTGTCCCTGCTCCATTATCAATGTTCAGTGAGAGTGATTCAGACATGAAATCCGTTAATATAGATGACTTGCTGCCCAAAGAAAAGgttgtttaccctttcattttatttcattatatttttttctgttttacaacttggtaaaaaaatttaattagctggtaaaaattattgattgaaatatgtc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA