1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CAGCTACACCAAAGCAAATTAGAGAGCTTATGCAGGTTGATGGCCTAACTAACGATGAAGTGAAGAGCCATTTACAAgtgagttcttggaacttgtttttttttggtccatttaactgcttgtcttttgtgatgattcatgaggcatttaaggaaaaaaatcacaccaagttgtaattatgttatgaagtttggattgagattgatgatacggtcatgtatggttgcag
species | Glycine max |
transcript | GLYMA07G33130.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TTATGCAGGTTGATGGCCTAACTAACGATGAAGTGAAGAGCCATTTACAA AAATACCGACTTCATACGCGGAGAGTTCCTGCTGCAAGTTCTAATCAGCCAEST: gi|4396409|gb|AI495406.1|AI495406
genomic: TTATGCAGGTTGATGGCCTAACTAACGATGAAGTGAAGAGCCATTTACAAgtgagttctt ... atggttgcagAAATACCGACTTCATACGCGGAGAGTTCCTGCTGCAAGTTCTAATCAGCCA
EST: TTATGCAGGTTGATGGCCTAACTAACGATGAAGTGAAGAGCCATTTACAA AAATACCGACTTCATACGCGGAGAGTTCCTNGCTG-AAGTTCTAATCAGCCEST: gi|254331378|gb|GR843390.1|GR843390
genomic: TTATGCAGGTTGATGGCCTAACTAACGATGAAGTGAAGAGCCATTTACAAgtgagttctt ... atggttgcagAAATACCGACTTCATACGCGGAGAGTTCCT-GCTGCAAGTTCTAATCAGCC
EST: TTATGCAGGTTGATGGCCTAACTAACGATGAAGTGAAGAGCCATTTACAA AAATACCGACTTCATACGCGGAGAGTTCCTGCTGCAAGTTCTAATCAGCCAEST: gi|254331379|gb|GR843391.1|GR843391
genomic: TTATGCAGGTTGATGGCCTAACTAACGATGAAGTGAAGAGCCATTTACAAgtgagttctt ... atggttgcagAAATACCGACTTCATACGCGGAGAGTTCCTGCTGCAAGTTCTAATCAGCCA
EST: CCTAACTAACGATGAAGTGAAGAGCCATTTACAA AAATACCGACTTCATACGCGGAGAGTTCCTGCTGCAAGTTCTAATCAGCCAEST: gi|51341836|gb|CO983153.1|CO983153
genomic: CCTAACTAACGATGAAGTGAAGAGCCATTTACAAgtgagttctt ... atggttgcagAAATACCGACTTCATACGCGGAGAGTTCCTGCTGCAAGTTCTAATCAGCCA
EST: TTATGCAGGTTGATGGCCTAACTAACGATGAAGTGAAGAGCCATTTACAA AAATACCGACTTCATACGCGGAGAGTTCCTGCTGCAAGTTCTAATCAGCCA
genomic: TTATGCAGGTTGATGGCCTAACTAACGATGAAGTGAAGAGCCATTTACAAgtgagttctt ... atggttgcagAAATACCGACTTCATACGCGGAGAGTTCCTGCTGCAAGTTCTAATCAGCCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAGCTACACCAAAGCAAATTAGAGAGCTTATGCAGGTTGATGGCCTAACTAACGATGAAGTGAAGAGCCATTTACAAgtgagttcttggaacttgtttttttttggtccatttaactgcttgtcttttgtgatgattcatgaggcatttaaggaaaaaaatcacaccaagttgtaattatgttatgaagtttggattgagattgatgatacggtcatgtatggttgcag
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