1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
GTTCGAGTGCAAGCAATTAGAGGTCTGCCTCTTTTTTGTAAGGATACACCTGAGAATATTGGGAAGATGGTTGATATTCTTGTGCAAATTCTTGGGTCTGgtaagttgaagtcattgaagtttttgcgttgttgagaacttaaccatgattatgattctgatattttcccctttaattcttgtag
species | Glycine max |
transcript | GLYMA07G32480.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TGAGAATATTGGGAAGATGGTTGATATTCTTGTGCAAATTCTTGGGTCTG AGGAATTTGTGGAGCGTGATGCAGTACATAAGGCTCTTATGTCTTTGCTGAEST: gi|213617036|gb|DB961516.1|DB961516
genomic: TGAGAATATTGGGAAGATGGTTGATATTCTTGTGCAAATTCTTGGGTCTGgtaagttgaa ... attcttgtagAGGAATTTGTGGAGCGTGATGCAGTACATAAGGCTCTTATGTCTTTGCTGA
EST: TGAGAATATTGGGAAGATGGTTGATATTCTTGTGCAAATTCTTGGGTCTG AGGAATTTGTGGAGCGTGATGCAGTACATAAGGCTCTTATGTCTTTGCTGAEST: gi|209719847|gb|BW674999.1|BW674999
genomic: TGAGAATATTGGGAAGATGGTTGATATTCTTGTGCAAATTCTTGGGTCTGgtaagttgaa ... attcttgtagAGGAATTTGTGGAGCGTGATGCAGTACATAAGGCTCTTATGTCTTTGCTGA
EST: TGAGAATATTGGGAAGATGGTTGATATTCTTGTGCAAATTCTTGGGTCTG AGGAATTTGTGGAGCGTGATGCAGTACATAAGGCTCTTATGTCTTTGCTGAEST: gi|213590208|gb|DB963813.1|DB963813
genomic: TGAGAATATTGGGAAGATGGTTGATATTCTTGTGCAAATTCTTGGGTCTGgtaagttgaa ... attcttgtagAGGAATTTGTGGAGCGTGATGCAGTACATAAGGCTCTTATGTCTTTGCTGA
EST: TGAGAATATTGGGAAGATGGTTGATATTCTTGTGCAAATTCTTGGGTCTG AGGAATTTGTGGAGCGTGATGCAGTACATAAGGCTCTTATGTCTTTGCTGAEST: gi|298193123|gb|HO033557.1|HO033557
genomic: TGAGAATATTGGGAAGATGGTTGATATTCTTGTGCAAATTCTTGGGTCTGgtaagttgaa ... attcttgtagAGGAATTTGTGGAGCGTGATGCAGTACATAAGGCTCTTATGTCTTTGCTGA
EST: TGAGAATATTGGGAAGATGGTTGATATTCTTGTGCAAATTCTTGGGTCTG AGGAATTTGTGGAGCGTGATGCAGTACATAAGGCCCTTATGTCTTTGCTGA
genomic: TGAGAATATTGGGAAGATGGTTGATATTCTTGTGCAAATTCTTGGGTCTGgtaagttgaa ... attcttgtagAGGAATTTGTGGAGCGTGATGCAGTACATAAGGCTCTTATGTCTTTGCTGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTCGAGTGCAAGCAATTAGAGGTCTGCCTCTTTTTTGTAAGGATACACCTGAGAATATTGGGAAGATGGTTGATATTCTTGTGCAAATTCTTGGGTCTGgtaagttgaagtcattgaagtttttgcgttgttgagaacttaaccatgattatgattctgatattttcccctttaattcttgtag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG