1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GCTCGAGAATTCTGCAACAAATCTTTCAGGATCTCCAAAGCATGATGGGCCAGGAGCTGCAGGTGCTAATGCATCTTCTCTATTAGAGgtttggaaaaattgtcattcttcatttgatattcattatcagtaattacaaatatacatgcatatttcttctattcattgtgctacag
species | Glycine max |
transcript | GLYMA07G29660.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: AGCTGCAGGTGCTAATGCATCTTCTCTATTAGAG ACAGGAAAAGCTTTTACTGCEST: gi|207714192|gb|GD694971.1|GD694971
genomic: AGCTGCAGGTGCTAATGCATCTTCTCTATTAGAGgtttggaaaa ... tgtgctacagACAGGAAAAGCTTTTACTGC
EST: AGCTGCAGGTGCTAATGCATCTTCTCTATTAGAG ACAGGAAAAGCTTTTACTGCAAAGGGAATGCAAGTTCTTGAATATGTTGGTEST: gi|12773689|gb|BG238616.1|BG238616
genomic: AGCTGCAGGTGCTAATGCATCTTCTCTATTAGAGgtttggaaaa ... tgtgctacagACAGGAAAAGCTTTTACTGCAAAGGGAATGCAAGTGCTTGAATATGTTGGT
EST: AGCATGATGGGCCAGGAGCTGCAGGTGCTAATGCATCTTCTCTATTAGAG ACAGGANAAGCTNTTACTGCAAAGGGAATGCAAGTGCTTGAATATGTTGGGEST: gi|208061845|gb|GD856297.1|GD856297
genomic: AGCATGATGGGCCAGGAGCTGCAGGTGCTAATGCATCTTCTCTATTAGAGgtttggaaaa ... tgtgctacagACAGGAAAAGCTTTTACTGCAAAGGGAATGCAAGTGCTTGAATATGTTGG-
EST: AGCATGATGGGCCAGGAGCTGCAGGTGCTAATGCATCTTCTCTATTAGAG ACAGGAAAAGCTTTTACTGCAAAGGGAATGCAAGTGCTTGAATATGTTGGTEST: gi|207690544|gb|GD670600.1|GD670600
genomic: AGCATGATGGGCCAGGAGCTGCAGGTGCTAATGCATCTTCTCTATTAGAGgtttggaaaa ... tgtgctacagACAGGAAAAGCTTTTACTGCAAAGGGAATGCAAGTGCTTGAATATGTTGGT
EST: AGCTGCAGGTGCTAATGCATCTTCTCTATTAGAG ACAGGAAAAGCTTTTACTGCAAAGGGAATGCAAGTTCTTGAATATGTTGGTEST: gi|193313054|gb|FK278281.1|FK278281
genomic: AGCTGCAGGTGCTAATGCATCTTCTCTATTAGAGgtttggaaaa ... tgtgctacagACAGGAAAAGCTTTTACTGCAAAGGGAATGCAAGTGCTTGAATATGTTGGT
EST: AGCTGCAGGTGCTAATGCATCTTCTCTATTAGAG ACAGGAAAAGCTTTTACTGCAAAGGGAATGCAAGTGCTTGAATATGTTGGT
genomic: AGCTGCAGGTGCTAATGCATCTTCTCTATTAGAGgtttggaaaa ... tgtgctacagACAGGAAAAGCTTTTACTGCAAAGGGAATGCAAGTGCTTGAATATGTTGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCTCGAGAATTCTGCAACAAATCTTTCAGGATCTCCAAAGCATGATGGGCCAGGAGCTGCAGGTGCTAATGCATCTTCTCTATTAGAGgtttggaaaaattgtcattcttcatttgatattcattatcagtaattacaaatatacatgcatatttcttctattcattgtgctacag
- - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG