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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAAGGCCAGGGACCAGTTTGTGATTCGTGCTGGTTCGGATACTGAGGTTTTGTGGAACGATGCCAGGCATTTAAAGCCTGATCCTGTTTATAAGCGTGCAgtgagtggacgttttatttcagtatcttgtactatttaatatttacaagtgccctacttttacatgatttttttattgctgctggcatgggtgttcatgtattttttttaataacag

Basic information

species Glycine max
transcript GLYMA07G14870.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193608010|gb|FK557035.1|FK557035
EST:     TGTGGAACGATGCCAGGCATTTAAAGCCTGATCCTGTTTATAAGCGTGCA                         TTTTGGACAGAGAGTTTTGTGC
genomic: TGTGGAACGATGCCAGGCATTTAAAGCCTGATCCTGTTTATAAGCGTGCAgtgagtggac ... ttaataacagTTTTGGACAGAGAGTTTTGTGC
EST: gi|193465122|gb|FK432027.1|FK432027
EST:     AACGATGCCAGGCATTTAAAGCCTGATCCTGTTTATAAGCGTGCA                         TTTTGGACAGAGAGTTTTGTGCAATGGTCTCCTTTGGGGACATACTTGGCC
genomic: AACGATGCCAGGCATTTAAAGCCTGATCCTGTTTATAAGCGTGCAgtgagtggac ... ttaataacagTTTTGGACAGAGAGTTTTGTGCAATGGTCTCCTTTGGGGACATACTTGGCC