Skip to another splice site:
1  
 5'  3'   
2  
 5'  3'   
3  
 5'  3'   
4  
 5'  3'   
5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTCAGGATCAGTTTGTCTTGATGTTATCAATCAAACCTGGAGTCCCATGTTTGgtaatgttctttctttaaacctaatgagaaaatatttggttttctatttaagttttccatttagaaattttttggttcattttcacatgtctaaatatatgcattgtttcag

Basic information

species Glycine max
transcript GLYMA07G07540.2
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|6914865|gb|AW396395.1|AW396395
EST:     GTTTGTCTTGATGTTATCAATCAAACCTGGAGTCCCATGTTTG                         ATCTTGTCAATGTGTTTGAGGTGTTTCTACCACAACTTCTTCTGTATCCCA
genomic: GTTTGTCTTGATGTTATCAATCAAACCTGGAGTCCCATGTTTGgtaatgttct ... attgtttcagATCTTGTCAATGTGTTTGAGGTGTTTCTACCACAACTTCTTCTGTATCCCA
EST: gi|58023135|gb|CX709876.1|CX709876
EST:     AGGATCAGTTTGTCTTGATGTTATCAATCAAACCTGGAGTCCCATGTTTG                         ATCTTGTCAATGTGTTTGAGGTGTTTCTACCACAACTTCTTCTGTATCCCA
genomic: AGGATCAGTTTGTCTTGATGTTATCAATCAAACCTGGAGTCCCATGTTTGgtaatgttct ... attgtttcagATCTTGTCAATGTGTTTGAGGTGTTTCTACCACAACTTCTTCTGTATCCCA
EST: gi|31464781|gb|CD406794.1|CD406794
EST:     AGGATCAGTTTGTCTTGATGTTATCAATCAAACCTGGAGTCCCATGTTTG                         ATCTTGTCAATGTGTTTGAGGTGTTTCTACCACAACTTCTTCTGTATCCCA
genomic: AGGATCAGTTTGTCTTGATGTTATCAATCAAACCTGGAGTCCCATGTTTGgtaatgttct ... attgtttcagATCTTGTCAATGTGTTTGAGGTGTTTCTACCACAACTTCTTCTGTATCCCA
EST: gi|10252837|gb|BE820603.1|BE820603
EST:     AGGATCAGTTTGTCTTGATGTTATCAATCAAACCTGGAGTCCCATGTTTG                         ATCTTGTCAATGTGTTTGAGGTGTTTCTACCACAACTTCTTCTGTATCCCA
genomic: AGGATCAGTTTGTCTTGATGTTATCAATCAAACCTGGAGTCCCATGTTTGgtaatgttct ... attgtttcagATCTTGTCAATGTGTTTGAGGTGTTTCTACCACAACTTCTTCTGTATCCCA
EST: gi|14011775|gb|BG726697.1|BG726697
EST:     AGGATCAGTTTGTCTTGATGTTATCAATCAAACCTGGAGTCCCATGTTTG                         ATCTTGTCAATGTGTTTGAGGTGTTTCTACCACAACTTCTTCTGTATCCCA
genomic: AGGATCAGTTTGTCTTGATGTTATCAATCAAACCTGGAGTCCCATGTTTGgtaatgttct ... attgtttcagATCTTGTCAATGTGTTTGAGGTGTTTCTACCACAACTTCTTCTGTATCCCA
EST: gi|15812810|gb|BI785085.1|BI785085
EST:     AGGATCAGTTTGTCTTGATGTTATCAATCAAACCTGGAGTCCCATGTTTG                         ATCTTGTCAATGTGTTTGAGGTGTTTCTACCACAACTTCTTCTGTATCCCA
genomic: AGGATCAGTTTGTCTTGATGTTATCAATCAAACCTGGAGTCCCATGTTTGgtaatgttct ... attgtttcagATCTTGTCAATGTGTTTGAGGTGTTTCTACCACAACTTCTTCTGTATCCCA
EST: gi|151400703|gb|EV270517.1|EV270517
EST:     AGGATCAGTTTGTCTTGATGTTATCAATCAAACCTGGAGTCCCATGTTTG                         AACTTGTCAATGTGTTTGAGGTGTTTCTACCACAACTTCTTCTGTATCCCA
genomic: AGGATCAGTTTGTCTTGATGTTATCAATCAAACCTGGAGTCCCATGTTTGgtaatgttct ... attgtttcagATCTTGTCAATGTGTTTGAGGTGTTTCTACCACAACTTCTTCTGTATCCCA
EST: gi|23730924|gb|BU763571.1|BU763571
EST:     AGGATCAGTTTGTCTTGATGTTATCAATCAAACCTGGAGTCCCATGTTTG                         ATCTTGTCAATGTGTTTGAGGTGTTTCTACCACAACTTCTTCTGTATCCCA
genomic: AGGATCAGTTTGTCTTGATGTTATCAATCAAACCTGGAGTCCCATGTTTGgtaatgttct ... attgtttcagATCTTGTCAATGTGTTTGAGGTGTTTCTACCACAACTTCTTCTGTATCCCA